sharlatan pushed a commit to branch master
in repository guix.
commit e4cd1b9d8f7402a9d16aaa937795fcbd84577065
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Thu Apr 24 11:25:07 2025 +0100
gnu: python-pgmpy: Skip more tests, run in parallel.
* gnu/packages/statistics.scm (python-pgmpy) [arguments] <test-flags>:
Skip 4 more tests, run in up to 8 threads to improve performance,
supported upstream.
[native-inputs]: Add python-pytest-xdist.
Change-Id: I7071114299dc2dc4e52e79a36fcda0d12892653f
---
gnu/packages/statistics.scm | 32 +++++++++++++++++++++++---------
1 file changed, 23 insertions(+), 9 deletions(-)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 787634c824..13f80627b6 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -3328,11 +3328,24 @@ statistical summary in arrays and enumerables.")
"1hg6wrg3jcac71zn4gknni1wrn38wa86ka3sgp2bndz59mx6sr2s"))))
(build-system pyproject-build-system)
(arguments
- (list #:test-flags
- #~(list "-k" (string-append
- "not test_pillai"
- " and not test_estimate_with_cache_no_llm_calls"
- " and not test_estimate_with_orientations"))))
+ (list
+ #:test-flags
+ #~(list "--numprocesses" (number->string (min 8 (parallel-job-count)))
+ "-k" (string-join
+ ;; AssertionError: False is not true
+ (list "not test_query_evidence"
+ ;; ValueError: Experimental support for categorical
+ ;; data is not implemented for current tree method
+ ;; yet.
+ "test_pillai"
+ "test_estimate_with_cache_no_llm_calls"
+ "test_estimate_with_orientations"
+ ;; _flapack.error: (liwork>=max(1,10*n)||liwork==-1)
+ ;; failed for 10th keyword liwork: dsyevr:liwork=1
+ "test_estimate"
+ "test_score_bnlearn"
+ "test_score_manual")
+ " and not "))))
(propagated-inputs (list python-daft
python-joblib
python-networkx
@@ -3348,13 +3361,14 @@ statistical summary in arrays and enumerables.")
(native-inputs (list python-mock
python-pyro-ppl
python-pytest
+ python-pytest-xdist
python-setuptools
python-wheel
python-xgboost))
(home-page "https://github.com/pgmpy/pgmpy";)
(synopsis "Probabilistic Graphical Models library")
- (description "This package provides a library for Probabilistic
-Graphical Models. It can be used for learning (Structure and Parameter),
-inference (Probabilistic and Causal), and simulations in Bayesian
-Networks.")
+ (description
+ "This package provides a library for Probabilistic Graphical Models. It
+can be used for learning (Structure and Parameter), inference (Probabilistic
+and Causal), and simulations in Bayesian Networks.")
(license license:expat)))
