guix_mirror_bot pushed a commit to branch master
in repository guix.
commit 531eb76de80107ba89cc32fd0748cbe20f09f9fd
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Wed Oct 15 22:01:08 2025 +0100
gnu: python-ndcube: Update to 2.3.4.
* gnu/packages/astronomy.scm (python-ndcube): Update to 2.3.4.
[arguments] <test-flags>: Rework skipped test and run more tests.
<phases>: Remove 'break-cycle.
[propagated-inputs]: Add python-scipy.
[native-inputs]: Remove python-scipy and python-wheel; add
python-specutils.
Change-Id: If88dc9e964a8d0137472008f267fbefe5edd652f
---
gnu/packages/astronomy.scm | 46 ++++++++++++++++++++--------------------------
1 file changed, 20 insertions(+), 26 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index c7fc7a4709..aa489fab52 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -5818,39 +5818,32 @@ Carlo.")
(define-public python-ndcube
(package
(name "python-ndcube")
- (version "2.3.2")
+ (version "2.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ndcube" version))
(sha256
- (base32 "0bv073jfdkyh9nqgijw7ihl46000i124ar912lv67pbcq8wpjwz8"))))
+ (base32 "0nwy0h1xvs6gw13nygfqx34nqkiixj40pf913n6h7bjfvqkyg2f1"))))
(build-system pyproject-build-system)
(arguments
(list
- ;; tests: 393 passed, 7 skipped, 10 xfailed
+ ;; tests: 397 passed, 7 skipped, 10 xfailed
#:test-flags
- #~(list "--numprocesses" (number->string (parallel-job-count))
- "-k" (string-join
- (list
- ;; Break cycle: python-ndcube -> python-specutils ->
- ;; python-ndcube, see
- ;; <https://github.com/sunpy/ndcube/issues/733>.
- "not test_rebin_specutils"
- ;; Introduced with astropy 6.1.3, see
- ;; <https://github.com/sunpy/ndcube/issues/758>.
- "test_2d[celestial_2d_ape14_wcs]"
- "test_2d[celestial_2d_fitswcs]"
- ;; XXX: Not sure why it fails: ValueError: Too many input
- ;; arguments - expected 1, got 2.
- "test_slice_drop_dimensions")
- " and not "))
+ #~(list "--numprocesses" (number->string (min 8 (parallel-job-count)))
+ #$@(map (lambda (test) (string-append "--deselect="
+
"ndcube/wcs/wrappers/tests/"
+ "test_resampled_wcs.py::"
+ test))
+ ;; ResampledLowLevelWCS Transformation
+ ;; This transformation has 2 pixel and 2 world dimensions
+ ;;
+ ;; - Array shape (Numpy order): (2.3333333333333335,
15.0)
+ ;; + Array shape (Numpy order): (2, 15)
+ (list "test_2d[celestial_2d_ape14_wcs]"
+ "test_2d[celestial_2d_fitswcs]")))
#:phases
#~(modify-phases %standard-phases
- (add-after 'unpack 'break-cycle
- (lambda _
- (substitute* "ndcube/tests/test_ndcube.py"
- (("from specutils import Spectrum1D") ""))))
(add-before 'check 'set-home-env
(lambda _
;; Tests require HOME to be set.
@@ -5864,17 +5857,18 @@ Carlo.")
python-pytest-mpl
;; python-pytest-memray ; not packaged yet
python-pytest-xdist
- python-scipy
python-setuptools
python-setuptools-scm
- python-sunpy-minimal
- python-wheel))
+ python-specutils
+ python-sunpy-minimal))
(propagated-inputs
(list python-astropy
python-gwcs
+ python-numpy
+ python-scipy
+ ;; [optional]
python-matplotlib
python-mpl-animators
- python-numpy
python-reproject))
(home-page "https://docs.sunpy.org/projects/ndcube/";)
(synopsis "Multi-dimensional contiguous and non-contiguous coordinate
aware arrays")
