guix_mirror_bot pushed a commit to branch r-team
in repository guix.
commit 30d5bf8c9b87a2ce510542198dc822ab1909042a
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Tue Nov 25 13:50:11 2025 +0100
gnu: r-xcms: Update to 4.8.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.8.0.
[propagated-inputs]: Add r-data-table.
[native-inputs]: Add r-rhdf5.
Change-Id: Icddb002bc87f1bb5c685241ab014422329cd8e7c
---
gnu/packages/bioconductor.scm | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a15f9cdcaf..28bb4105f4 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -20874,14 +20874,14 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
(define-public r-xcms
(package
(name "r-xcms")
- (version "4.6.0")
+ (version "4.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "xcms" version))
(sha256
(base32
- "1yf5x69f7m8bqassxzzhys7gbnvsyw79b13xlib156abyjvr5g2b"))))
+ "1d2p1hxa36423209cajl6b62rn7d1j0hf8s32p88yfxfv2rbswb8"))))
(properties
'((upstream-name . "xcms")
;; Avoid dependency cycle.
@@ -20893,6 +20893,7 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
(list r-biobase
r-biocgenerics
r-biocparallel
+ r-data-table
r-iranges
r-lattice
r-massspecwavelet
@@ -20909,7 +20910,7 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
r-spectra
r-summarizedexperiment))
(native-inputs
- (list r-knitr r-msdata r-testthat))
+ (list r-knitr r-msdata r-rhdf5 r-testthat))
(home-page "https://bioconductor.org/packages/xcms/";)
(synopsis "LC/MS and GC/MS mass spectrometry data analysis")
(description
