guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit b4d81d7e22419f499c56723af4745ef13d2a8b77
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Sat Dec 13 16:01:28 2025 +0000
gnu: python-tables: Update to 3.10.2-0.aad9079.
* gnu/packages/python-xyz.scm (python-tables): Update to
aad9079c80ce3ae7f385d00af760d171dcc10535 commit.
[source]: Switch to git-fetch providing comparability with python-numexpr.
<snippet>: Delete "hdf5-blosc" git submodule.
[phases]{pre-build}: Substitute "hdf5-blosc" source path.
[inputs]: Add hdf5-blosc.
Change-Id: I7624af17709e150cea4f316cc4fd7f1786c3df1c
---
gnu/packages/python-xyz.scm | 26 +++++++++++++++++++-------
1 file changed, 19 insertions(+), 7 deletions(-)
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 6f03082643..333dc93078 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -37097,18 +37097,25 @@ as possible in order to be comprehensible and easily
extensible.")
(define-public python-tables
(package
(name "python-tables")
- (version "3.10.2")
+ ;; XXX: Compatability fix for numexpr 2.13.0, see:
+ ;; <https://github.com/PyTables/PyTables/pull/1256>.
+ (properties '((commit . "aad9079c80ce3ae7f385d00af760d171dcc10535")
+ (revision . "0")))
+ (version (git-version "3.10.2"
+ (assoc-ref properties 'revision)
+ (assoc-ref properties 'commit)))
(source
(origin
- (method url-fetch)
- (uri (pypi-uri "tables" version))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/PyTables/PyTables";)
+ (commit (assoc-ref properties 'commit))))
+ (file-name (git-file-name name version))
(sha256
- (base32
- "0469jrkmp0qv8cmlqkizm3b8imyc97mk9pfn66ldpyl6f4m82i15"))
+ (base32 "0gnqj1gj6dnr167pacmynvghw8bwwll6nlz843rm95r07zi6blrm"))
(snippet '(begin
(use-modules (guix build utils))
- ;; TODO: Unbundle.
- ;; (delete-file-recursively "hdf5-blosc")
+ (delete-file-recursively "hdf5-blosc")
(delete-file-recursively "c-blosc")))))
(build-system pyproject-build-system)
(arguments
@@ -37131,6 +37138,10 @@ as possible in order to be comprehensible and easily
extensible.")
"\",\n" m)))))
(add-before 'build 'pre-build
(lambda _
+ (substitute* "setup.py"
+ (("hdf5-blosc/src")
+ (format #f "~a/src"
+ #$(package-source (this-package-input
"hdf5-blosc")))))
(invoke "make" "distclean") ;Regenerate C code with Cython
(setenv "BLOSC2_DIR" #$(this-package-input "cblosc2"))
(setenv "BLOSC_DIR" #$(this-package-input "c-blosc"))
@@ -37163,6 +37174,7 @@ as possible in order to be comprehensible and easily
extensible.")
c-blosc
c-blosc2
hdf5
+ hdf5-blosc
lzo))
(propagated-inputs
(list python-blosc2
