guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit 801903a27b2ba5f78496c4da42014e1cd63dc70e
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Sun Dec 14 15:54:31 2025 +0000
gnu: python-arviz: Update to 0.22.0.
* gnu/packages/statistics.scm (python-arviz): Update to 0.22.0.
[arguments] <test-flags>: Run base tests only, deselect 10 tests.
<phases>: Remove 'remove-radon, and 'write-permission; add 'pre-check.
[propagated-inputs]: Remove python-dm-tree, python-setuptools, and
python-wheel.
[native-inputs]: Add python-setuptools.
Change-Id: If8ab6c9917cb19463ab07935709d9d2f10c2329a
---
gnu/packages/statistics.scm | 76 +++++++++++++++++++++++++--------------------
1 file changed, 42 insertions(+), 34 deletions(-)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index facd439a70..80221c193e 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -320,46 +320,54 @@ be output in text, PostScript, PDF or HTML.")
(define-public python-arviz
(package
(name "python-arviz")
- (version "0.21.0")
- (source (origin
- (method git-fetch) ; PyPI misses some test files
- (uri (git-reference
- (url "https://github.com/arviz-devs/arviz";)
- (commit (string-append "v" version))))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "02bqpl61gzn65vhwspi6gx9ln2wlwh8xm418i8vhmls44rvszcxf"))))
+ (version "0.22.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/arviz-devs/arviz";)
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "04l1zsr2m80avvrh73v34sp4p9fzakmgliszsww2wmv99cl5jdk7"))))
(build-system pyproject-build-system)
(arguments
- ;; FIXME: matplotlib tests fail because of the "--save" test flag.
- (list #:test-flags #~'("--ignore"
- "arviz/tests/base_tests/test_plots_matplotlib.py")
+ (list
+ ;; tests: 3384 passed, 147 skipped, 10 deselected
+ #:test-flags
+ #~(list "-k" (string-join
+ ;; Network access is required.
+ (list "not test_plot_ppc_transposed"
+ "test_plot_separation[kwargs0]"
+ "test_plot_separation[kwargs1]"
+ "test_plot_separation[kwargs2]"
+ "test_plot_separation[kwargs3]"
+ "test_plot_separation[kwargs4]"
+ "test_plot_trace_legend[False-False]"
+ "test_plot_trace_legend[False-True]"
+ "test_plot_trace_legend[True-False]"
+ "test_plot_trace_legend[True-True]")
+ " and not ")
+ "arviz/tests/base_tests/")
#:phases
#~(modify-phases %standard-phases
- (add-after 'unpack 'remove-radon
- (lambda _
- (delete-file
- ;; This dataset is loaded remotely, it's not supposed to
- ;; be copied locally.
- "arviz/data/example_data/code/radon/radon.json")))
- (add-before 'check 'write-permission
+ (add-before 'check 'pre-check
(lambda _
- ;; 3 tests require write permission.
(setenv "HOME" "/tmp"))))))
- (native-inputs (list python-cloudpickle python-pytest))
- (propagated-inputs (list python-dm-tree
- python-h5netcdf
- python-matplotlib
- python-numpy
- python-packaging
- python-pandas
- python-scipy
- python-typing-extensions
- python-xarray
- python-xarray-einstats
- python-setuptools
- python-wheel))
+ (native-inputs
+ (list python-cloudpickle
+ python-pytest
+ python-setuptools))
+ (propagated-inputs
+ (list python-h5netcdf
+ python-matplotlib
+ python-numpy
+ python-packaging
+ python-pandas
+ python-scipy
+ python-typing-extensions
+ python-xarray
+ python-xarray-einstats))
(home-page "https://github.com/arviz-devs/arviz";)
(synopsis "Exploratory analysis of Bayesian models")
(description
