Thank you for the help, that seemed to work.
I was under the impression from this thread that pygwy cannot be used in a
standalone python script:
http://www.mail-archive.com/[email protected]/msg00494.html
Perhaps this limitation has changed since that was written?
Are there instructions for using pygwy in this way? I tried adding both
/usr/lib/gwyddion/modules/ (where my pygwy.so file is located) and
/usr/share/gwyddion/pygwy/ (where gwyutils is located) to my PYTHONPATH
variable. However, I get
ImportError: No module named gwy
if I try to import gwy.
Thank you!
Dave Doty
On Tue, Oct 8, 2013 at 6:33 AM, David Nečas (Yeti) <[email protected]>wrote:
> On Mon, Oct 07, 2013 at 05:41:56PM -0700, Dave Doty wrote:
> > What appears to happen is that the Datafield method fit_lines is called
> > properly on all opened windows. However, the two invocations to
> > gwy.gwy_process_func_run do not work on any open window, except the one
> > that is active when I start the batch processing.
>
> Using module functions on non-current data is tricky. I modified you
> script so that it works – the key was adding a
> gwy_app_data_browser_select_data_field() call – but note that running
> processing modules on data that are not displayed in any window may not
> work.
>
> It might be better to do similar processing outside Gwyddion such as in
>
> https://sourceforge.net/p/gwyddion/mailman/message/30725548/
>
> unless, of course, you want to open interactively the data and then run
> the script on them.
>
> Regards,
>
> Yeti
>
>
>
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