On  0, "David Nečas (Yeti)" <[email protected]> wrote:
> On Wed, Jun 29, 2016 at 01:48:52PM +0000, Shi Choong wrote:
> > I have some AFM images and I am suspecting some form of distortion,
> > most likely skew. I know there is a Affine function to correct such
> > distortion but my images have irregular pattern and I do not know what
> > could I do to correct this distortion. I have collected two images
> > (continuously scanned) of the same area, if this info is helpful.
> 
> The drift correction based on correlation of points in subsequent
> scans is not yet available in Gwyddion, sorry.  A third-party module was
> implemented AFAIK by people at University of Kiel, but I do not know if
> it is publicly available – it does not seem so.
> 
> Regards,
> 
> Yeti

Hello Yeti and Shi Choong,

even though I left science, I still read from time to time the gwyddion 
mailing-list. 
I am still curious how this project develops.

Yeti, before I left my lab/office in 2015 I send the sources of this drift 
correction module to you via e-mail.
Maybe you still store it somewhere. As far as I remember you had no time or 
energy to implement/adopt the code. 
We also had a discussion in terms of different coding styles or unknown 
potential issues when implementing. 

However, it seems that this module is really worth implementing. It runs out of 
the box and so far it did not 
show any memory leaks. Not only me but many students and collegues of mine 
worked efficiently with this software.


Maybe you should give it a try to implement it as a permanent module. Since AFM 
images often deal with irregular
patterns this might be a useful tool.


Cheers

-- 
Dr. Mathias Müller

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