Hi Lisa, While there is a -volume flag (e.g., for subcortical structures), it is not mandatory. This command works for me:
wb_command -cifti-create-label $OUTPUT_DLABEL_1 \ -left-label $INPUT_LABEL_LH -right-label $INPUT_LABEL_RH I'm sorry I don't know how to extract the frames. Donna On Apr 29, 2014, at 2:48 AM, "Luo,Yishan" <lys84...@hotmail.com> wrote: > Dear all, > > I would like to do the following things with task fMRI. > > I threshold the file HCP_Q1-2_R120_tfMRI_ALLTASKS_level3_hp200_s4.dscalar.nii > to get the activation region > using -cifti-math "x>5" > > I want to extract the average timeseries from the roi region. > But it seems that -cifti-parcellate requires a label file as input. And > -cifti-create-label requires a volume file as input to create a label. > But my output from -cifti-math is in cifti format, it is neither a volume nor > a label. > > How can I do to transform it? > > Another question is how can I extract several frames from > "tfMRI_MOTOR_LR_Atlas.dtseries.nii" file, such as from frame 10 to 20? > > > Thanks a lot! > > Best Regards, > Lisa > > > > > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
