Hello, I am working on running the diffusion preprocessing pipeline using the script from https://github.com/Washington-University/Pipelines/blob/master/Examples/Scripts/DiffusionPreprocessingBatch.sh as a reference.
When it is supposed to copy the positive raw data to the working directory I keep getting an ERROR: could not open file (for the imcp command). The files themselves are not corrupted, and imcp works, and I checked that my StudyFolder path and EnvScript are correct. I am new to preprocessing HCP data so its very possible that I'm missing something basic. Does anyone know how to fix this kind of issue? I would be happy to provide my script for reference. Thank you so much! Levi Solomyak _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
