Yes, I have, like so:

wb_command -cifti-convert -from-nifti ${NiftiIn} ${CiftiTemplate} ${CiftiOut} 
-reset-scalars

But not in the context you describe.  I was using randomise to generate group 
permuted t-maps and then bring them back to cifti before doing TFCE on the 
surface.  (Now I use PALM for that: http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/PALM)


On Nov 23, 2015, at 1:03 PM, Joe Borrello <jborre...@gmail.com> wrote:

> Hi, I'm a PhD student just getting started on a project that involves 
> analyzing some data from the 500 subjects release and wanted to know if 
> anyone has had any experience using the -cifti-convert -from-nifti operations 
> to make cifti files. Ultimately, the goal is to compare test-retest 
> variability in myelin maps using the T1w/T2w method and the means of 
> comparison I was aiming to do would involved cifti-math.
> 
> Thanks in advance,
> Joe Borrello
> -- 
> Joseph Borrello
> 
> CEO & Co-Founder, Dynami-Cal Inc.
> 
> Biomedical Engineer, MSIT Rapid Prototyping Center
> 
> Research Assistant, Mount Sinai TMII
> 
> PhD Candidate, ISMMS
> 
> josephborrello.com
> 
> dynami-cal.com
> 
> msit.mssm.edu
> 
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> 


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