Okay great, that was my understanding. Just wanted to make sure I wasn't missing something.
Thanks! Andrew On Thu, Sep 6, 2018 at 9:54 AM Glasser, Matthew <glass...@wustl.edu> wrote: > In that case I believe you want “NONE” because you don’t need to mess with > it—it was already done correctly. > > Matt. > > From: Andrew Poppe <poppe...@gmail.com> > Date: Thursday, September 6, 2018 at 9:49 PM > To: Matt Glasser <glass...@wustl.edu> > Cc: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> > Subject: Re: [HCP-Users] Bias Field setting in Resting State Stats script > > We used "SEBASED" for the bias correction setting in the fmri volume step. > > Andrew > > On Tue, Sep 4, 2018 at 5:40 PM Glasser, Matthew <glass...@wustl.edu> > wrote: > >> What setting did you use in fMRIVolume? >> >> Matt. >> >> From: <hcp-users-boun...@humanconnectome.org> on behalf of Andrew Poppe < >> poppe...@gmail.com> >> Date: Wednesday, September 5, 2018 at 4:35 AM >> To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> >> Subject: [HCP-Users] Bias Field setting in Resting State Stats script >> >> Hello all, >> >> I'm working on running the resting state stats batch script on our own >> data, and I am a bit stuck on what to set the bias field setting to. Based >> on the comments in the code as well as the code itself I think I have a >> general idea of what it's doing, but I wanted to specifically ask since I'm >> not 100% on what the setting should be. Could you briefly explain what the >> options represent? >> >> Thanks a lot! >> >> Andrew Poppe, Ph.D. >> Postdoctoral Researcher >> Olin Neuropsychiatry Research Center >> Institute of Living >> Hartford Hospital >> >> _______________________________________________ >> HCP-Users mailing list >> HCP-Users@humanconnectome.org >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> >> >> ------------------------------ >> >> The materials in this message are private and may contain Protected >> Healthcare Information or other information of a sensitive nature. If you >> are not the intended recipient, be advised that any unauthorized use, >> disclosure, copying or the taking of any action in reliance on the contents >> of this information is strictly prohibited. If you have received this email >> in error, please immediately notify the sender via telephone or return mail. >> > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
