It is a custom function that I already pointed to. Matt.
From: Timothy Coalson <tsc...@mst.edu<mailto:tsc...@mst.edu>> Date: Wednesday, September 19, 2018 at 3:27 PM To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>> Cc: Andrew Poppe <poppe...@gmail.com<mailto:poppe...@gmail.com>>, "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] MATLAB libraries in Resting State Stats script 'rms' appears to be part of the signal toolbox. 'normalize' seems to be a built-in matlab function, but I have no idea about 'normalise'. Tim On Wed, Sep 19, 2018 at 11:15 AM, Glasser, Matthew <glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote: I believe rms is a matlab provided function. The custom functions are in here: https://github.com/Washington-University/HCPpipelines/tree/master/global/matlab Matt. From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Andrew Poppe <poppe...@gmail.com<mailto:poppe...@gmail.com>> Date: Wednesday, September 19, 2018 at 11:57 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] MATLAB libraries in Resting State Stats script Hello all, I've been working with the resting state stats batch script, and it seems to be running correctly on our data. I have it set to use the compiled "MCR" version of the RestingStateStats matlab script. However, I'd like to make a couple modifications to that script, most notably to save out some data files that are not currently set to save to file. When I modify the matlab version of the script and then set the shell script to use normal matlab instead of MCR, I get errors that functions normalise and rms are not defined. I was wondering if anyone knows where these functions are defined (or what library path I'd need to add in the matlab script). I'm hesitant to simply write my own versions of those functions since I don't want to assume I know exactly how they're normalizing/computing root mean square. Any help would be appreciated. Thanks, Andrew Poppe, Ph.D. Postdoctoral Researcher Olin Neuropsychiatry Research Center Institute of Living Hartford Hospital _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
