This is an interesting topic. Despite the 3% being a good idea the border depends more on the structure being traced than on the brain itself (arguably those two are also related). I haven’t managed to find border tracing on the tutorial of annotations. Am I looking on the wrong place? Also are the traceable borders closed curves or can be also simple curves? Ie lines instead of borders?
Best and thanks for all this work Demian -- Demian Wassermann, PhD demian.wasserm...@inria.fr Associate Research Professor (CRN) Parietal Lab INRIA Saclay Ile-de-France 1 Rue Honoré d'Estienne d'Orves, 91120 Palaiseau > On 10 Oct 2018, at 10:51, Harwell, John <jharw...@wustl.edu> wrote: > > There is nothing in the user interface to adjust the size of the spheres > while drawing a border. In a previous version of Workbench, the size was > 2mm. However, 2mm was far too large when drawing borders on very small > brains (babies, mice, etc) so the size was changed to 3% of the longest > surface axis (typically posterior-to-anterior). > > John > >> On Oct 9, 2018, at 12:58 PM, Gaurav Patel <gauravpa...@gmail.com> wrote: >> >> here’s a screen shot of the draw borders output vs. a finished border >> (symbol diameter set to 2mm). I tried to change the ID sphere size >> property, and that did not change. On a machine with 1.23 still installed, >> the draw borders output is the same size as the 2mm diameter finalized >> borders. I am drawing this on the tutorial surface >> >> <Screen Shot 2018-10-09 at 1.56.25 PM.png> >> ________________________ >> gaurav patel >> gauravpa...@gmail.com >> pateldsclab.net >> >>> On Oct 9, 2018, at 1:07 PM, Harwell, John <jharw...@wustl.edu> wrote: >>> >>> How huge is huge? When drawing a new border, the symbol size should be >>> about 3% of the longest surface axis. On a human surface, that appears be >>> about 5mm. There is no way for the user to adjust the symbol size when >>> drawing. >>> >>> I am using Workbench version 1.3.2 and the size should be the same in 1.3.1. >>> >>> John Harwell >>> >>>> On Oct 9, 2018, at 11:37 AM, Gaurav Patel <gauravpa...@gmail.com> wrote: >>>> >>>> Hi—when I am drawing borders in wb_view 1.31, the diameters of the red >>>> spheres is huge, making is difficult to see what I am drawing. This was >>>> not the case in 1.23. Is there a way to change that setting? Finishing >>>> the border reduces the size of the spheres to the setting in the borders >>>> menu, so that setting doesn’t make a difference. Thanks >>>> ________________________ >>>> gaurav patel >>>> gauravpa...@gmail.com >>>> pateldsclab.net >>>> >>>> >>>> _______________________________________________ >>>> HCP-Users mailing list >>>> HCP-Users@humanconnectome.org >>>> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >>> >> > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
