Hello,
My understanding is that HDF5_ALLOW_EXTERNAL_SUPPORT should not be used
(and defaults to NO) according to the doc : I tried to set it anyway.
Also, on Ubuntu when I "sudo apt-get install" zlib, it seems I get an
autotools install, so CMake does not find the zlib install (missing
Find*.cmake): this is why I tried to build from source and install ZLib
/ SZip (I use ZLIB / SZIP tarballs provided by
www.hdfgroup.org/ftp/HDF5/releases/... as they have been patched to
create Find*.cmake files at install time).
My last try (called within a bash script where $1 is a path to the
final install where libz and libszip are already installed) :
export CMAKE_PREFIX_PATH="$1:$1/share/cmake:$CMAKE_PREFIX_PATH"
export CMAKE_MODULE_PATH="$1/share/cmake:$CMAKE_MODULE_PATH"
export CMAKE_INCLUDE_PATH="$1/include:$CMAKE_INCLUDE_PATH"
export CMAKE_LIBRARY_PATH="$1/lib:$CMAKE_LIBRARY_PATH"
export CMAKE_PROGRAM_PATH="$1/bin:$CMAKE_PROGRAM_PATH"
cmake -DCMAKE_INSTALL_PREFIX:PATH=$1
-DCMAKE_BUILD_TYPE:STRING=RelWithDebInfo -DBUILD_SHARED_LIBS:BOOL=ON
\
-DHDF5_BUILD_HL_LIB:BOOL=ON -DHDF5_BUILD_TOOLS:BOOL=ON
-DHDF_ENABLE_LARGE_FILE:BOOL=ON \
-DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING="NO"
\
-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON
-DZLIB_INCLUDE_DIR:PATH="$1/include"
-DZLIB_LIBRARY:FILEPATH="$1/lib/libz.so" \
-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON
-DSZIP_INCLUDE_DIR:PATH="$1/include"
-DSZIP_LIBRARY:FILEPATH="$1/lib/libszip.so" ..
Note : I use now -DZLIB_LIBRARY:FILEPATH / -DSZIP_LIBRARY:FILEPATH
according to the doc.
Gives me this :
[ 36%] Linking C shared library ../bin/libhdf5.so
/usr/bin/ld.bfd.real: can't find -lZLIB_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lSZIP_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lZLIB_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lSZIP_EXPORT_LIBRARIES
I miss something but can't figure our what ?... I guess options are
upsetting each other...
Franck
Le 2015-10-12 15:56, Allen Byrne a écrit :
Franck,
HDF5_ALLOW_EXTERNAL_SUPPORT is not a BOOL, it is a STRING "NO,
SVN, TGZ".
Allen
On Sunday, October 11, 2015 06:23:49 PM houssen wrote:
Hello,
How to build HDF5 (1.8.15) with ZLib and SZIP (on Ubuntu-14.04) ?
With this (called within a bash script where $1 is a path to the
final
install where libz and libszip are already installed) :
export CMAKE_PREFIX_PATH="$1/share/cmake:$CMAKE_PREFIX_PATH"
export CMAKE_MODULE_PATH="$1/share/cmake:$CMAKE_MODULE_PATH"
export CMAKE_INCLUDE_PATH="$1/include:$CMAKE_INCLUDE_PATH"
export CMAKE_LIBRARY_PATH="$1/lib:$CMAKE_LIBRARY_PATH"
export CMAKE_PROGRAM_PATH="$1/bin:$CMAKE_PROGRAM_PATH"
cmake -DCMAKE_INSTALL_PREFIX:PATH=$1
-DCMAKE_BUILD_TYPE:STRING=RelWithDebInfo -DBUILD_SHARED_LIBS:BOOL=ON
\
-DHDF5_BUILD_HL_LIB:BOOL=ON -DHDF5_BUILD_TOOLS:BOOL=ON
-DHDF_ENABLE_LARGE_FILE:BOOL=ON
\
-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON
-DZLIB_INCLUDE_DIR:PATH="$1/include"
-DZLIB_LIBRARY:PATH="$1/lib/libz.so"
\
-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON
-DSZIP_INCLUDE_DIR:PATH="$1/include"
-DSZIP_LIBRARY_RELEASE:PATH="$1/lib/libszip.so"
-DHDF5_ENABLE_SZIP_ENCODING:BOOL=ON ..
I got this :
[ 0%] Linking C shared library ../bin/libhdf5.so
/usr/bin/ld.bfd.real: can't find -lZLIB_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lSZIP_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lZLIB_EXPORT_LIBRARIES
/usr/bin/ld.bfd.real: can't find -lSZIP_EXPORT_LIBRARIES
collect2: error: ld returned 1 exit status
With this :
cmake -DCMAKE_INSTALL_PREFIX:PATH=$1
-DCMAKE_BUILD_TYPE:STRING=RelWithDebInfo -DBUILD_SHARED_LIBS:BOOL=ON
\
-DHDF5_BUILD_HL_LIB:BOOL=ON -DHDF5_BUILD_TOOLS:BOOL=ON
-DHDF_ENABLE_LARGE_FILE:BOOL=ON
\
-DHDF5_ALLOW_EXTERNAL_SUPPORT:BOOL=ON
-DZLIB_USE_EXTERNAL:BOOL=ON
-DSZIP_USE_EXTERNAL:BOOL=ON
\
-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON
-DZLIB_URL:PATH="https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.15/src/
ZLib.tar.gz" \
-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON
-DHDF5_ENABLE_SZIP_ENCODING:BOOL=ON
-DSZIP_URL:PATH="https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.15/src/
SZip.tar.gz" ..
I got this :
CMake Error at CMakeFilters.cmake:66 (message):
ZLib is Required for ZLib support in HDF5
Franck
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