kadirozde commented on a change in pull request #701: PHOENIX-5709 Simplify 
index update generation code for consistent glo…
URL: https://github.com/apache/phoenix/pull/701#discussion_r376891928
 
 

 ##########
 File path: 
phoenix-core/src/main/java/org/apache/phoenix/hbase/index/IndexRegionObserver.java
 ##########
 @@ -409,91 +413,220 @@ private void populatePendingRows(BatchMutateContext 
context) {
       }
   }
 
-  private Collection<? extends Mutation> 
groupMutations(MiniBatchOperationInProgress<Mutation> miniBatchOp,
-                                                        long now, ReplayWrite 
replayWrite) throws IOException {
-      Map<ImmutableBytesPtr, MultiMutation> mutationsMap = new HashMap<>();
-      boolean copyMutations = false;
-      for (int i = 0; i < miniBatchOp.size(); i++) {
+  public static void setTimestamp(Mutation m, long ts) throws IOException {
+      for (List<Cell> cells : m.getFamilyCellMap().values()) {
+          for (Cell cell : cells) {
+              CellUtil.setTimestamp(cell, ts);
+          }
+      }
+  }
+
+    public static long getTimestamp(Mutation m) throws IOException {
+        for (List<Cell> cells : m.getFamilyCellMap().values()) {
+            for (Cell cell : cells) {
+                return cell.getTimestamp();
+            }
+        }
+        return 0;
+    }
+
+  private static void removeColumn(Put put, Cell deleteCell) {
+      byte[] family = CellUtil.cloneFamily(deleteCell);
+      List<Cell> cellList = put.getFamilyCellMap().get(family);
+      if (cellList == null) {
+          return;
+      }
+      Iterator<Cell> cellIterator = cellList.iterator();
+      while (cellIterator.hasNext()) {
+          Cell cell = cellIterator.next();
+          if (Bytes.compareTo(cell.getQualifierArray(), 
cell.getQualifierOffset(), cell.getQualifierLength(),
+                  deleteCell.getQualifierArray(), 
deleteCell.getQualifierOffset(), deleteCell.getQualifierLength()) == 0) {
+              cellIterator.remove();
+              if (cellList.isEmpty()) {
+                  put.getFamilyCellMap().remove(family);
+              }
+              return;
+          }
+      }
+  }
+
+
+  private void merge(Put current, Put previous) throws IOException {
+      for (List<Cell> cells : previous.getFamilyCellMap().values()) {
+          for (Cell cell : cells) {
+              if (!current.has(CellUtil.cloneFamily(cell), 
CellUtil.cloneQualifier(cell))) {
+                  current.add(cell);
+              }
+          }
+      }
+  }
+
+  private Put mergeNew(Put current, Put previous) throws IOException {
+      Put next = new Put(current);
+      for (List<Cell> cells : previous.getFamilyCellMap().values()) {
+          for (Cell cell : cells) {
+              if (!current.has(CellUtil.cloneFamily(cell), 
CellUtil.cloneQualifier(cell))) {
+                  next.add(cell);
+              }
+          }
+      }
+      return next;
+  }
+
+  /**
+   * When there are multiple put mutations on the data same row within the 
same batch, this method merged them into
+   * one mutation.
+   */
+  private void mergePendingPutMutations(MiniBatchOperationInProgress<Mutation> 
miniBatchOp,
+                                        Map<ImmutableBytesPtr, Integer> 
pendingPuts,
+                                        long now) throws IOException {
+      for (Integer i = 0; i < miniBatchOp.size(); i++) {
           if (miniBatchOp.getOperationStatus(i) == IGNORE) {
               continue;
           }
           Mutation m = miniBatchOp.getOperation(i);
+          // skip this mutation if we aren't enabling indexing
           if (this.builder.isEnabled(m)) {
-              // Track whether or not we need to
-              ImmutableBytesPtr row = new ImmutableBytesPtr(m.getRow());
-              if (mutationsMap.containsKey(row)) {
-                  copyMutations = true;
-              } else {
-                  mutationsMap.put(row, null);
+              // Unless we're replaying edits to rebuild the index, we update 
the time stamp
+              // of the data table to prevent overlapping time stamps (which 
prevents index
+              // inconsistencies as this case isn't handled correctly 
currently).
+              setTimestamp(m, now);
+              if (m instanceof Put) {
+                  ImmutableBytesPtr rowKeyPtr = new 
ImmutableBytesPtr(m.getRow());
+                  Integer opIndex = pendingPuts.get(rowKeyPtr);
+                  pendingPuts.put(rowKeyPtr, i);
 
 Review comment:
   It is not safer to wait as this is done under row lock. However, it is more 
readable if it is done after the merge. So, I will change the order.

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