Hello,

Is there a way in Jalview to select some columns and then left-justify all
the sequences in those columns, while leaving the rest of the alignment
that follows the selected region alone?

For example, I am aligning antibody sequences with different length CDRs.
I'd like to select the whole CDR region, left justify all the sequences and
then remove empty columns. I don't need to align the CDR loop sequences of
different lengths to each other.

Thanks,
Roland

---------------------------------------------
Roland Dunbrack (he/his/him/him)
Institute for Cancer Research
Fox Chase Cancer Center
Philadelphia PA 19111
http://dunbrack.fccc.edu
http://dunbrack.org
_______________________________________________
Jalview-discuss mailing list
[email protected]
http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-discuss

Reply via email to