If you want to turn a binary file into text, use base64. JSmol can then
convert any base64-encoded data back into a string in JavaScript with:
var bytes = org.jmol.io.Base64.decodeBase64(strBase64)
It might take a bit of tweaking of JSmol to implement that generally.
Bob
On Mon, Jan 21, 2013 at 7:08 PM, Gutow, Jonathan H <gu...@uwosh.edu> wrote:
> I am playing with making WebExport produce JSmol compatible output. The
> goal is to make output that is transportable enough that people can use it
> locally or put it up in a directory on a plain vanilla web server. As with
> the past renditions, it is not going to be competitive with more
> sophisticated web sites that an expert might make. We want this to be a
> place people can start and get something working quickly.
>
> I think I have got most of the kinks worked out. However, without a real
> server backend j2sjmol cannot handle data that is not in text file format.
> This means that I need to take any data files that are
> gzipped/.jmol/.pngj, etc and break them out into all text versions. I
> would like to do this without reloading each view. Ideally, I'd like to
> pipe the binary file through the file handlers directly to the text files
> (.spt, .pdb, .mol .log, etc...). Any thoughts on the best way to go about
> this?
>
> I do think that the static image .png file will actually always be a
> .pngj, so that it can be used for download.
>
> Thanks,
> Jonathan
> Dr. Jonathan H. Gutow
> Chemistry Department gu...@uwosh.edu
> UW-Oshkosh Office:920-424-1326
> 800 Algoma Boulevard FAX:920-424-2042
> Oshkosh, WI 54901
> http://www.uwosh.edu/facstaff/gutow/
>
>
>
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--
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Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
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it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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