Sorry - mol is a JmolMolecule instance retrieved from a Viewer instance
like so: myViewer.getModelSet().getMolecules[i].
Thanks for the tip Bob. So if I call a load command of that format using
AppConsole#execute it will be thread-safe?
David
On 6 February 2013 22:52, Robert Hanson <hans...@stolaf.edu> wrote:
> I have no idea. What's "mol" ?
>
> By the way, loadInLine is not thread-safe. It is much better to use a
> script and just enter the data as:
>
> load DATA "model mydata"
> .....mol data here...
> end "model mydata" .... more load parameters here....
>
>
>
> On Wed, Feb 6, 2013 at 4:17 PM, N David Brown <hubd...@gmail.com> wrote:
>
>> After importing a structure of N atoms from molfile format using
>> Viewer#loadInline:
>>
>> System.out.println(mol.atomCount); // 0
>> System.out.println(mol.nodes.length); // N
>>
>> Why is atomCount zero?
>>
>> David
>>
>>
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>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Chemistry Department
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
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