Angel, Thanks for the atom description link. It appears the pdb I am using is incorrectly structured; other files work OK. However, I have not found a property returned by jmolgetpropertyasarray that identifies whether an atom is part of the sidechain or backbone. Am I overlooking something (obvious)? Steve
>Steve, > >With properly formatted PDB files: >- use asterisk instead of prime >- sugar atoms have standard ID's, so you could try to check/select >base apart from pentose using those, or else use built-in "sidechain" >and "backbone" keywords. > >I am not used to callbacks, but I think it could be done that way. >I put a description of atom IDs on >http://wiki.jmol.org/index.php/AtomSets > > > > > >------------------------------ > >Using Tomcat but need to do more? Need to support web services, security? >Get stuff done quickly with pre-integrated technology to make your job easier >Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo >http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642 > > >------------------------------ > >_______________________________________________ >Jmol-users mailing list >Jmol-users@lists.sourceforge.net >https://lists.sourceforge.net/lists/listinfo/jmol-users > > >End of Jmol-users Digest, Vol 1, Issue 1153 >******************************************* Dr. Steven R. Spilatro Chair, Department of Biology Marietta College Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642 _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users