[EMAIL PROTECTED] wrote: >> [EMAIL PROTECTED] wrote: >> --* console start *-- >> > sh jmol -ons /tmp/test.mol.spt >> Executing script: /tmp/test.mol.spt >> FileManager opening /tmp/test.mol.spt >> compileError(cannot SET:zoom) >> --* console stop *-- > > OK, this is not a file-read issue; it's a chime script issue.
That's it. And concerning this issue one of my subtasks at the moment is to figure out, which "chime script" statements will make trouble after migration to Jmol (in addition to those ones that are not yet implemented). BTW, i modified Your suggested command line to: jmol -Djmol.logger.debug=true -ons /tmp/test.control.spt 2>&1 | tee /tmp/jmol.log which ends in a slightly more communicative output :-); _but_: with at last up to 20.000 lines of script statements it's still a pain, not to be able to disable the "stop-on-next-error" behavior. > There have > been efforts to do this sort of conversion -- > http://www.chem.umass.edu/people/cmartin/Jmol/Development/%20CHIME2Jmol.html > comes to mind. But this could be looked at again. Yes, i "googled" this a few days ago, too. But unfortunately it's a "chimeHTML-2-JmolHTML" converter. That's not what i'm looking for. As i mentioned in my response to Egon, our HTML output is driven by the cocoon framework. That is, our data gets processed by so called "pipelines" with template transformation mechanism etc. > > Eric Martz or Tim Driscoll could probably help you better than anyone. > You shouldn't have to start from scratch on this. I made some efforts to go through the process flow in Jmol yesterday afternoon in order to separate the relevant methods (file resolver *and* script evaluation) but still any further hints are welcome. > > I do note that "set zoom center" has not been requested or implemented. > And, frankly, from this description, I can't imagine what it does (or that > it would be particularly valuable: > > Set Zoom > > Syntax: set zoom center <boolean> > > The Chime set zoom center This command enables (and disables) the use of > automatic centering of the 'translation center' or 'center of rotation' > while zooming. If no boolean is specified than 'true' is assumed. See > 'translate center' for more information. In Chime this defaults to ON > (TRUE) at startup. I'll talk to one of our "Chime-Guru's" as soon as possible because i can't imagine its purpose neither :-( > > This sounds like a crude implementation of what I just recently added: > "zoomTo". > > This particular set of Chime commands -- set zoom, center, and translate > -- have been implemented in a considerably more flexible way in Jmol, so > getting Chime scripts that implement those commands to do the exact same > thing in Jmol is probably not desireable anyway. > > I recommend taking a look at the latest documentation on moveTo, zoomTo, > and set windowCentered prior to converting these Chime commands. > > http://www.stolaf.edu/academics/chemapps/jmol/docs Well, i'll play around a bit with that. EJ -- Eike Jordan <[EMAIL PROTECTED]> | FIZ CHEMIE BERLIN | Franklin Str. 11 ------ ,__o | 10587 Berlin ------ _-\_<, | ------ (+)/'(+) | Tel. : 0049-30-39977 214 ------------------------------------------------------------------------- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642 _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
