Oliver, it's a bug I need to fix, but use this:
connect (_c and within(1.6, coord, {0 0 0})) aromatic modify;
for good results (_c for carbon; add the word "coord" explicitly)
Bob Hanson
Oliver Stueker wrote:
> Hi, i want to report a possible bug:
>
> When I load e.g. a benzene molecule (like attached benzene.xyz) and
> then submit the following command on the Jmol-Console:
>
> connect (_carbon and within(1.6, {0 0 0})) aromatic modify;
> or even only:
> select carbon and within(1.6, {0 0 0});
>
> Jmol hangs immediately and I can't rotate the molecule anymore.
> There's even no output on the Java Console. Only Jmol-Console
> sometimes reports a "pending" (as far I can see only in case of the
> Applet).
>
> tested with:
> * Jmol Applet and Application Versions 11.3.31 & 11.3.38
> and Applet 11.3.39_dev (2007-10-18 22:28) on
> http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm
> with the C6H6.smol from the server.
> * Windows XP SP2
> * Java 1.6.0_03 and 1.5.0_13 (only Application 11.3.38)
> * Firefox 2 in case of applets
>
> Oliver
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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