Small additions to Bob's reply:
> The cavities are totally created within Jmol. No additional program. The command is "isosurface", with "cavity" keyword > Animations. 100 PDB files is not a problem. You can either load them > as one file Or load them one file at a time, using "load append". The filenames can probably be fed using a loop in Javascript or in JmolScript, if they are something like protein1.pdb, protein2.pdb, protein3.pdb etc ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
