Hi,
I am very new to Jmol, so I apologize if this is a naive question.
I would like to highlight parts of my protein molecule where two
amino acids of my choice occur consecutively.

For example suppose I am interested in all occurrences of the string 
[Ala][Glu] in
my protein sequence. I tried the select ALA and select GLU, but this 
selects all
Alanine and Glutamine residues and not only the parts where Alanine is 
preceded
by Glutamine.

I think the select() function should help me, but I am not able to 
figure it out.

Thanks for your help!
-Sushmita

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