OK, I was using restrict as I am doing small molecules from a pdb file of a structure solved bu NMR, and the coloring is atom-by-atom. I thought the use of restrict was preferred as that is what the example in the documentation under 'multiple nmr models'.
I'm also wondering if there is a way to tap into a predefined color gradient (e.g. the 'temperature' color scheme used for anisotropic temperature) but rather than have it in the pdb file, access it using a set of scaled values. I'm doing that manually now with a script and a set of calculations that create a custom set of 128 rbg color codes scaled to my data (like a heat map). Thanks for the help! -----Original Message----- From: Angel Herráez [mailto:[email protected]] Sent: Wednesday, December 02, 2009 2:23 PM To: [email protected] Subject: Re: [Jmol-users] displaying multiple models Try by all means to avoid "restrict". Use "display" or "model" = "frame" Restrict acts on the atoms and bonds radii, and is not reversible, while display is wholly reversible (that is, you don't lose your atoms style). For models/frames, the proper command is model ---------------------------------------------------------------------------- -- Join us December 9, 2009 for the Red Hat Virtual Experience, a free event focused on virtualization and cloud computing. Attend in-depth sessions from your desk. Your couch. Anywhere. http://p.sf.net/sfu/redhat-sfdev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users No virus found in this incoming message. Checked by AVG - www.avg.com Version: 8.5.238 / Virus Database: 270.14.84/2530 - Release Date: 11/27/09 07:58:00 ------------------------------------------------------------------------------ Join us December 9, 2009 for the Red Hat Virtual Experience, a free event focused on virtualization and cloud computing. Attend in-depth sessions from your desk. Your couch. Anywhere. http://p.sf.net/sfu/redhat-sfdev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
