Well right now I am using it standalone while I work out the method for
converting a set of atom property values I calculate into a pseudo heatmap,
and then coloring the atoms accordingly using a rasmol-type script.
From: Robert Hanson [mailto:[email protected]]
Sent: Wednesday, December 02, 2009 1:39 PM
To: [email protected]
Subject: Re: [Jmol-users] displaying multiple models
presuming here you are using the applet, you use two jmolApplet() commands,
usually in a <table> construct. See, for example,
http://chemapps.stolaf.edu/jmol/docs/examples-11/sync2.htm
On Wed, Dec 2, 2009 at 12:33 PM, Brian Moldover <[email protected]> wrote:
So do you load the pdb file multiple times? I'm reading the documentation
but obviously not clear on how to do this or I wouldn't have asked J
From: Robert Hanson [mailto:[email protected]]
Sent: Wednesday, December 02, 2009 12:13 PM
To: [email protected]
Subject: Re: [Jmol-users] displaying multiple models
You just use two applets and mouse-synchronize them
On Wed, Dec 2, 2009 at 9:44 AM, Brian Moldover <[email protected]> wrote:
Hello all,
Is there a way to display multiple models contained in a single PDB file as
a set of tiled windows, or something similar, as opposed to the overlaid
structures? I using a custom coloring for atoms which will be different for
each molecule, and would like to be able to visually compare each model
side-by-side. These are mostly NMR structures, hence the multiple models.
Brian Moldover, Ph.d.
----------------------------------------------------------------------------
--
Join us December 9, 2009 for the Red Hat Virtual Experience,
a free event focused on virtualization and cloud computing.
Attend in-depth sessions from your desk. Your couch. Anywhere.
http://p.sf.net/sfu/redhat-sfdev2dev
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
No virus found in this incoming message.
Checked by AVG - www.avg.com
Version: 8.5.238 / Virus Database: 270.14.84/2530 - Release Date: 11/27/09
07:58:00
----------------------------------------------------------------------------
--
Join us December 9, 2009 for the Red Hat Virtual Experience,
a free event focused on virtualization and cloud computing.
Attend in-depth sessions from your desk. Your couch. Anywhere.
http://p.sf.net/sfu/redhat-sfdev2dev
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
No virus found in this incoming message.
Checked by AVG - www.avg.com
Version: 8.5.238 / Virus Database: 270.14.84/2530 - Release Date: 11/27/09
07:58:00
------------------------------------------------------------------------------
Join us December 9, 2009 for the Red Hat Virtual Experience,
a free event focused on virtualization and cloud computing.
Attend in-depth sessions from your desk. Your couch. Anywhere.
http://p.sf.net/sfu/redhat-sfdev2dev
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
