At 12/5/09, Eric Martz wrote:
>In Mac OS X, is there some way to specify the positions of the Jmol
>application windows (main model view window and console window) at
>startup? I found how to specify the size of the main window on this
>list in a discussion on Sept 12, 2008, namely, in Terminal
>
>java -jar jmol.jar -g600x600
>
>What about the console window, and what about positions of the 2
>default windows? When trying different versions of Jmol it would be
>really nice for them to open in a functional arrangement!
>
>Thanks, -Eric

I tried the following command in Terminal. Following a suggestion in 
the 2008 discussion, I dragged and dropped a Jmol into the Terminal, 
which supplied its absolute path and full filename:

java -jar 
/Users/emartz/Documents/MolVis/Molecular_Playground/Tamiflu/Jmol-11.8.12.jar 
-g400x600

It worked, but it stuck! Now, when I double-click a Jmol.jar file 
anywhere on my system (in Finder), it opens with the unwanted 400 x 
600 window. Also, it no longer opens the Jmol Console by default! Yikes!

As stated in 2008, you can get startup commandline help with "-h"

java -jar 
/Users/emartz/Documents/MolVis/Molecular_Playground/Tamiflu/Jmol-11.8.12.jar -h

I was unable to get the -D option combined with JmolConsole=true to 
work (I tried every syntax variation I could think of) but this 
works: -Jconsole.

So I issued

java -jar 
/Users/emartz/Documents/MolVis/Molecular_Playground/Tamiflu/Jmol-11.8.12.jar 
-g1020x750 -Jconsole

That works. I get a nice big main window and the console opens. But 
it doesn't stick! Yikes!!

So now I am worse off than before. Jmol opens with an unusable window 
and no Console, unless I issue a Terminal command every time.

I have inspected the Java Preferences dialog carefully and I don't 
see anyplace that my command is being saved there. Notably, the java 
applet has an "Options" button to insert runtime parameters, but the 
java application does not!

On another java issue, I just upgraded to 1.5_022, the latest version 
offered by Apple. For a long time, I've had Java Preferences, 
Advanced, Java Console set to Hide Console. Every time the applet is 
invoked in the web browser, the Java Console appeared in the Dock. 
However, that no longer happens. Once I changed the preference to 
"Show Console" (instead of "Hide Console") it appears for the applet. 
However, it never appears for the application, and even if it is open 
when the application starts, nothing is reported.

Help, Please! -Eric




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