Happy to report that Jmol 11.8.18 and Jmol 11.9.20 have working CNS/XPLOR
and MRC/CCP4 electron density map readers. If you are interested, files can
be found at http://chemapps.stolaf.edu/jmol/docs/examples-11/Jmol-11.zip.
A typical mapping would look something like this:
load 3hyd.pdb
isosurface within 2.0 {*} "3hyd_map.ccp4" mesh nofill opaque yellow
If you what an opaque solid surface, I recommend the FULLYLIT option. For
some reason they are coming out inside out....
All the other issues (slab, restrict, wireframes) Eric found should be fixed
as well.
I'd like suggestions for the best default settings for the cutoff for these.
Bob
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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