Yes, upping the memory given to java seems to have helped. I think in the
process of editing the page you may have messed something else up since the
following is showing at the bottom of the page.
function klick(){
isosurface display within 5.0 ({atomIndex = _atomPicked});
center {atomIndex = _atomPicked};
}
set PickCallback "jmolscript:klick();";
***********************************************
Jeff Hansen
Department of Chemistry and Biochemistry
DePauw University
602 S. College Ave.
Greencastle, IN 46135
[email protected]
***********************************************
On Aug 16, 2010, at 4:20 PM, Alexander Rose wrote:
> Hi,
>
> Am 16.08.2010 um 20:58 schrieb Jeff Hansen:
>
>> Alex,
>>
>> I'm not sure what you are doing on your web page, but it is causing some
>> strange behavior for me on Safari 5.0 on OS X 10.6.4. Several times it
>> crashed the browser. It seems to be opening the page and somehow
>> automatically opening what looks like Firebug, but it is behind the applets
>> so I can't see it well except for when scrolling.
>>
>
> I'm sorry, forgot about smaller monitors, made the applet smaller.
>
> It was opening FirebugLite, I removed it, wasn't need here.
>
> I also removed one of the applets, the remaining one is enough to make my
> point.
>
> Your browser was probably crashing, because the applet did not had enough
> memory, 512M should be enough
> (http://wiki.jmol.org/index.php?title=Jmol_Applet#Giving_JmolApplet_more_memory_to_work_with).
> I thought stating 'jmolSetMemoryMb("512");' would do the trick, but it it
> seems not to work, neither for the signed nor the unsigned applet.
>
> Sorry for the inconvenience
> Alex
>
>
>
>>
>> Jeff
>>
>>
>> ***********************************************
>> Jeff Hansen
>> Department of Chemistry and Biochemistry
>> DePauw University
>> 602 S. College Ave.
>> Greencastle, IN 46135
>> [email protected]
>> ***********************************************
>>
>>
>> On Aug 16, 2010, at 12:14 PM, Alexander Rose wrote:
>>
>>> Hi,
>>>
>>> ----- Ursprüngliche Mail -----
>>>> Von: "Robert Hanson" <[email protected]>
>>>> An: [email protected]
>>>> Gesendet: Dienstag, 10. August 2010 14:48:50
>>>> Betreff: Re: [Jmol-users] change the visible part of an isosurface without
>>>> reloading
>>>> On Tue, Aug 10, 2010 at 7:33 AM, Alexander Rose <
>>>> [email protected] > wrote:
>>>>
>>>> It's certainly an interesting idea, though. Sort of a "hide selected
>>>> triangles" option, I think. Hmm. We have:
>>>>
>>>> isosurface ID "foo" show
>>>> isosurface ID "foo" hide
>>>>
>>>> maybe
>>>>
>>>> isosurface ID "foo" show within 2.0 {atomset}
>>>> isosurface ID "foo" show all
>>>>
>>>
>>> thanks for implementing it as 'isosurface display within 2.0 {atomset}'
>>>
>>> Example: http://weirdbyte.de/jmol-test/html/jvxl_vs_ccp4_speed.html
>>>
>>> One minor thing: When changing the display params via a jmolscript
>>> PickCallback (see below), I get a loading indicator which stays until a
>>> mouseclick. However it works. (Tested on Linux/Firefox, Mac/Firefox/Safari)
>>>
>>>
>>> Alex
>>>
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