forwarding this to Jmol users.... Chris, I'm glad to hear it's "just" a Safari/Windows issue. At least until we hear back from you.
Angel -- Do we need to make a wiki entry about compatibility issues? Bob On Fri, Aug 20, 2010 at 11:45 AM, Christopher Lloyd < [email protected]> wrote: > Bob, > > Firefox 3.6.8, Chrome 5.0.375.126 and IE 8.0.7600.16385 load all the > examples on the page fine. > > I can test the page on my mac at home (OS X 10.5.8) on Safari and FF over > the weekend and let you know how that goes. > > Cheers, > > Chris > > > On Fri, August 20, 2010 5:36 pm, Robert Hanson wrote: > > Chris, > > > > Please try http://chemapps.stolaf.edu/jmol/docs/examples-12/new.htm with > a > > different browser on the same machine to see if it's specific to Safari > > (on > > Windows! shame shame...). I'm pretty sure it will be. Thanks. > > > > > > Bob > > > > > > On Fri, Aug 20, 2010 at 10:55 AM, Christopher Lloyd < > > [email protected]> wrote: > > > >> Hi, > >> > >> The command 'load =1blu' works fine on the > >> 'http://chemapps.stolaf.edu/jmol/docs/examples-12/simple.htm' webpage. > >> > >> Glad to hear the fault has already been reported. > >> > >> Cheers, > >> > >> Chris > >> > >> > >> > >> On Fri, August 20, 2010 4:39 pm, Robert Hanson wrote: > >> > Yes, that's understanble. #1 loads caffeine.xyz, which was loaded > >> > successfully by the page. > >> > > >> > This is a Mac Java bug. I think it's been reported. And you can't go > >> back > >> > to > >> > previous versions of Java once you have that installed, so you are > >> > probably > >> > out of luck until a new Mac Java version comes along and they fix > >> this. > >> > I'm > >> > pretty sure they are aware of it. > >> > > >> > Please try some file loading at > >> > http://chemapps.stolaf.edu/jmol/docs/examples-12/simple.htm > >> > > >> > for example: > >> > > >> > > >> > load =1blu > >> > > >> > in that command input box > >> > > >> > That tests the signed applet. > >> > > >> > Bob > >> > > >> > > >> > On Fri, Aug 20, 2010 at 10:26 AM, Christopher Lloyd < > >> > [email protected]> wrote: > >> > > >> >> Hi, > >> >> > >> >> I tried all the 'load' commands on the page > >> >> 'http://chemapps.stolaf.edu/jmol/docs/examples-12/new.htm' in Safari > >> >> 5.01 > >> >> Win7 64 bit (Java installation -Version 6 update 21). > >> >> > >> >> Results: > >> >> - On page load, the file successfully loads into the Jmol applet with > >> no > >> >> error messages. > >> >> - All of the 'load' commands under topics 5,4,3 and 2 fail with the > >> same > >> >> error messages as before. > >> >> - All of the 'load' commands under topic 1 work fine. > >> >> > >> >> Hope that helps, > >> >> > >> >> Chris Lloyd > >> >> > >> >> > >> >> On Thu, August 19, 2010 11:10 pm, Robert Hanson wrote: > >> >> > Jmol-users: Is this a known Java security bug issue? > >> >> > Christopher: Do you find the same problem for anything on that > >> page? > >> >> You > >> >> > can't load any file? > >> >> > > >> >> > How about > >> >> > > >> >> > http://chemapps.stolaf.edu/jmol/docs/examples-12/new.htm > >> >> > > >> >> > ? > >> >> > > >> >> > > >> >> > ---------- Forwarded message ---------- > >> >> > From: Christopher Lloyd <[email protected]> > >> >> > Date: Fri, Aug 13, 2010 at 4:31 AM > >> >> > Subject: Jmol v12.x applet and Safari 5.01 windows 7 64 bit. Load > >> >> > structure > >> >> > problem > >> >> > To: [email protected] > >> >> > > >> >> > > >> >> > Hi, > >> >> > > >> >> > I noticed a problem with the Jmol applet at > >> >> > http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm with > >> Safari > >> >> 5.01 > >> >> > on windows 7 64 bit (Java installation -Version 6 update 21). > >> >> > > >> >> > The 'load 1crn.pdb;a={"area1":{helix},"area2":{sheet}}' under '174. > >> >> > associative arrays' brings up 2 alert boxes (one after the other). > >> >> > > >> >> > 1st one says: > >> >> > > >> >> > "http://chemapps.stolaf.edu > >> >> > > >> >> > Applet jmolApplet0 reports an error of type ScriptException > >> >> > > >> >> > object: > >> >> > > >> >> > java.security.AccessControlException:access denied > >> >> > (java.net.SocketPermission chemapps.stolaf.edu:80 connect,resolve) > >> >> > --- > >> >> > load > > "1crn.pdb" < < " > >> >> > > >> >> > the second one says: > >> >> > > >> >> > "http://chemapps.stolaf.edu > >> >> > > >> >> > java.security.AccessControlException:access denied > >> >> > (java.net.SocketPermission chemapps.stolaf.edu:80 connect,resolve) > >> >> > --- > >> >> > load > > "1crn.pdb" < < > >> >> > > >> >> > script ERROR: java.security.AccessControlException:access denied > >> >> > (java.net.SocketPermission chemapps.stolaf.edu:80 connect,resolve) > >> >> > --- > >> >> > load > > "1crn.pdb" < < " > >> >> > > >> >> > This example works fine in Chrome. The version of jmol on the page > >> is > >> >> > 12.1.4_dev. > >> >> > > >> >> > Hope that's helpful. > >> >> > > >> >> > Cheers, > >> >> > > >> >> > Chris Lloyd > >> >> > > >> >> > > >> >> > > >> >> > > >> >> > > >> >> > > >> >> > -- > >> >> > Robert M. Hanson > >> >> > Professor of Chemistry > >> >> > St. Olaf College > >> >> > 1520 St. Olaf Ave. > >> >> > Northfield, MN 55057 > >> >> > http://www.stolaf.edu/people/hansonr > >> >> > phone: 507-786-3107 > >> >> > > >> >> > > >> >> > If nature does not answer first what we want, > >> >> > it is better to take what answer we get. > >> >> > > >> >> > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > >> >> > > >> >> > >> >> > >> >> -- > >> >> > >> >> > >> >> > >> > > >> > > >> > -- > >> > Robert M. Hanson > >> > Professor of Chemistry > >> > St. Olaf College > >> > 1520 St. Olaf Ave. > >> > Northfield, MN 55057 > >> > http://www.stolaf.edu/people/hansonr > >> > phone: 507-786-3107 > >> > > >> > > >> > If nature does not answer first what we want, > >> > it is better to take what answer we get. > >> > > >> > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > >> > > >> > >> > >> -- > >> > >> > >> > > > > > > -- > > Robert M. Hanson > > Professor of Chemistry > > St. Olaf College > > 1520 St. Olaf Ave. > > Northfield, MN 55057 > > http://www.stolaf.edu/people/hansonr > > phone: 507-786-3107 > > > > > > If nature does not answer first what we want, > > it is better to take what answer we get. > > > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > > > > -- > > > -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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