yeah, yeah. That is PRECISELY what JmolCD.js does. Automatic branching.
On Wed, Apr 18, 2012 at 10:09 AM, Otis Rothenberger
<osrot...@chemagic.com>wrote:
> Thanks Bob,
>
> That sounds like a plan if I can make it work in our AKA application. On a
> 3D view link in this application, I'm just trying to branch mobile devices
> to a non-Java option. Am I correct in assuming that in:
>
> applet.loadFile("xxxx")
>
> xxx can be a call to a server side script (my server) that loads a
> Resolver (or PubChem/ChemSpider) SDF file?
>
> Otis
>
>
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
> On Apr 18, 2012, at 10:52 AM, Robert Hanson wrote:
>
> Otis, forget that. Don't go there. Period. This is just what we are
> setting up now, and you are going to love it.
>
> 1) Use JmolCD.js
>
> 2) Follow the lead shown in
> http://chemapps.stolaf.edu/jmol/chemdoodle/test2.htm. You can use
> JmolCD.js to create a standard ChemDoodle canvas or a Jmol applet or have
> Jmol choose automatically based on the browser capability.
>
> 3) There is no need to have the MOL data stuffed into a variable that way.
> Just load the file from your server just like for Jmol, even if it is just
> a ChemDoodle canvas, using:
>
> applet.loadFile("xxxx")
>
>
> Bob
>
> On Wed, Apr 18, 2012 at 9:17 AM, Otis Rothenberger
> <osrot...@chemagic.com>wrote:
>
>> All,
>>
>> I know this is not a ChemDoodle list, but with all the recent ChemDoodle
>> activity on the list, I've been playing with the Web Components.
>>
>> Here's a big frustration, and maybe someone on the list can help me: If I
>> literally define a JavaScript molfile variable - e.g.:
>>
>> lsdfStr = 'CH4\nAPtclcactv04181210043D 0 0.00000 0.00000\n \n 5 4 0 0 0 0
>> 0 0 0 0999 V2000\n 0.0000 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0\n 0.0000
>> -0.8900 -0.6293 H 0 0 0 0 0 0 0 0 0 0 0 0\n 0.0000 0.8900 -0.6293 H 0 0 0 0
>> 0 0 0 0 0 0 0 0\n -0.8900 -0.0000 0.6293 H 0 0 0 0 0 0 0 0 0 0 0 0\n 0.8900
>> -0.0000 0.6293 H 0 0 0 0 0 0 0 0 0 0 0 0\n 1 2 1 0 0 0 0\n 1 3 1 0 0 0 0\n
>> 1 4 1 0 0 0 0\n 1 5 1 0 0 0 0\nM END\n$$$$\n'
>>
>> then I can dynamically load it into a Transformer3D Canvas - no problem.
>>
>> If on the other hand I define lsdfStr via AJAX to Resolver, subsequent
>> use of the same load routine throws an obscure JS error - TypeError: h is
>> undefined.
>>
>> If I directly copy the returned AJAX text and paste it into a direct
>> definition of lsdfStr, the dynamic load works.
>>
>> Any thoughts would be appreciated.
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>>
>>
>> ------------------------------------------------------------------------------
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>>
>>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> ------------------------------------------------------------------------------
> Better than sec? Nothing is better than sec when it comes to
> monitoring Big Data applications. Try Boundary one-second
> resolution app monitoring today. Free.
>
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>
>
>
>
> ------------------------------------------------------------------------------
> Better than sec? Nothing is better than sec when it comes to
> monitoring Big Data applications. Try Boundary one-second
> resolution app monitoring today. Free.
> http://p.sf.net/sfu/Boundary-dev2dev
> _______________________________________________
> Jmol-users mailing list
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> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Better than sec? Nothing is better than sec when it comes to
monitoring Big Data applications. Try Boundary one-second
resolution app monitoring today. Free.
http://p.sf.net/sfu/Boundary-dev2dev
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