This time sending from the correct address. ;-)
---------- Forwarded message ----------
Hi Bob and other fellow Jmol'ers,
When I run the following commands in Jmol 12.3.25:
{protein}.property_xxx = data(load("data_file.dat"),1,0,1 );
set userColorScheme deeppink white green ;
isosurface iso_sas1 SELECT {protein} ONLY SASURFACE 1.4 property_xxx
COLORSCHEME "user" COLOR RANGE -0.35 0.35 ;
I get :
iso_sas1 created with cutoff=0.0; isosurface count: 1
isosurface full data range -0.67112225 to 1.240843 with color scheme
spanning -0.67112225 to 1.240843
For me it seems that restricting the color range to -0.35 -> 0.35 doesn't
work.
Am I doing something wrong here? I would expect that larger values would
be mapped to the maximum RANGE values.
Related to that I think it would be a nice feature, if Jmol would be able
to show a legend of the gradient,
similar to the one in PyMol:
http://www.pymolwiki.org/index.php/File:Prot_contact_pot.png
Plus maybe indicating which color corresponds to 0.0 (in case the lower
bound is negative and the upper positive)
Oliver
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