I opened that with Jmol 13.0.14 with no problem. See
http://chemapps.stolaf.edu/jmol/temp/toadria.png
(This is a PNGJ file -- you should be able open it in Jmol.)
So I think you just need to upgrade.
On Tue, Mar 12, 2013 at 5:38 AM, Adrià Cereto Massagué <
[email protected]> wrote:
> Hi,
>
> I'm having a strange problem with a CCP4 and Jmol 13.0.6.
> I load a model from a pdb file, and then load the CCP4 file. When I do
> this in PyMol or Coot, the model fits inside the electron density at 1
> sigma. However, in Jmol, nothing fits. It looks like the electron density
> is offset or something like that. If I load a CCP4 file from the EDS it
> 'fits' as it should.
>
> If I couldn't get the expected result in Pymol or Coot without doing
> anything special, I would blame the CCP4 file, but that's not the case.
> Am I missing something?
> Here's a link to a zip archive with all the files needed to reproduce it
> (the PDB file, the 2 CCP4 files and a text file containing the script I use
> to load them): http://dl.dropbox.com/u/41040783/weird_edm.zip
>
> Any help woulb be appreciated.
>
> Regards,
>
> Adrià
>
> --
> *Adrià Cereto Massagué*
> Ph.D Student
> Nutrigenomics Research Group
> Biochemistry and Biotechnology Department
> Building N4, Campus Sescelades
> Universitat Rovira i Virgili
> Tarragona, Catalonia
>
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>
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Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
endpoint security space. For insight on selecting the right partner to
tackle endpoint security challenges, access the full report.
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