* Download Jmol-14.2.7_2014.10.12-binary.zip (58.6 MB)
<https://sourceforge.net/projects/jmol/files/latest/download?source=files> *
This installment of Jmol fixes a few recently found bugs:
Jmol.___JmolVersion="14.2.7_2014.10.12"
release
bug fix: msCIF reader incorrectly handling multiple Legendre orders
bug fix: msCIF reader incorrectly handling superspace operators with
x1,x2,x3 mixed into x4,x5
bug fix: CONTACT FULL does not report proper volume (Young ho Jhon)
bug fix: (Java only) write FILE fails for string (copy/pasted) data
JmolVersion="14.3.7_2014.10.10"
bug fix: set waitForMoveTo not controlling script for ROTATE x.x y.y
(finite spin)
bug fix: capture command not waiting properly for full spin
bug fix: msCIF reader: wave vectors of the form {a -a 0} were being ignored.
(14.3.6_2014.08.16 and 14.2.6)
And also is the first release of 14.2 since 14.2.4 (Aug 3, 2014).
bug fix: msCIF reader incorrectly handling multiple Legendre orders
bug fix: msCIF reader incorrectly handling superspace operators with
x1,x2,x3 mixed into x4,x5
bug fix: CONTACT FULL does not report proper volume (Young ho Jhon)
bug fix: (Java only) write FILE fails for string (copy/pasted) data
bug fix: set waitForMoveTo not controlling script for ROTATE x.x y.y
(finite spin)
bug fix: capture command not waiting properly for full spin
bug fix: isosurface molecular reader misassigning voxel source atom
bug fix: JSpecView integration not displaying properly
bug fix: JSmol does not allow Info._coverImage
bug fix: CGD reader for fractional coordinates; alternative EDGE syntax
bug fix: JavaScript j2sjmol.js -- should not create object .isArray()
method as it conflicts with
JavaScript Array.isArray
bug fix: CGD reader space groups set to Bilbao (origin 2) setting.
bug fix: Molden reader overlaying MO info and unit cell info
bug fix: interpretation of space group I41 by name only, without operations,
drops second (centered) C2 axis.
bug fix: exporter generally not allowing creating meshes with PovRAY
bug fix: Clazz.floatToLong not aliased as Clazz_floatToLong in
corebottom2.js/coretop2.js
-- causes CAPTURE command to fail for JSmol/HTML5
bug fix: magCIF reading with symmetry scaling (-x+1/2,-2x+y,z+1/2,+1
mx,2mx-my,-mz)
improperly rotates moments (1.34.cif)
bug fix: array sorting broken in JavaScript
bug fix: CIF reader not reading magnetic lattice centering for
incommensurately modulated structures
bug fix: {*}.modulation("M") not functional
bug fix: cartoon OFF does not remove nucleic bases from visible set
bug fix: select visible does not recalculate visible set
-- after RESTRICT, for instance; Eric Martz
-- at least since 14.1.14
load =1d66
cartoons only # if this is omitted, 'select visible' works correctly
refresh
restrict 28-36:B
print {visible}
bug fix: x = {visible} does not COPY the visible set
bug fix: spin broken in WebGL
bug fix: chainCaseSensitive ignored for select :a
bug fix: JmolData not reporting out properly
bug fix: CARTOON OFF does not remove visibility flag for alpha carbons
(introduced in jmol-14.1.17_2014.06.03)
bug fix: JSmol/HTML5 fails to show rockets
bug fix: setting structures after displaying rockets does not reset rockets
correctly
bug fix: load *xxxx/val validation loading not working (14.3.7_2014.09.07)
bug fix: Draw broken in JSmol/HTML5 in 14.3.7_2014.09.07
bug fix: Unit cell display and other characteristics offset or wrong when
crystallographic coordinates include an intrinsic offset from
Cartesian coordinates, as in the case of ENT/mmCIF 1hbb and 2hhb.
bug fix: PDB reader not reading SCALEn records; required in certain cases
for load =xxxx {1 1 1}
bug fix: Pending measurements lost when dragging to reposition molecule
bug fix: EM files not allowing unit cell creation for PDB or mmCIF files
bug fix: binary document reader can skip bytes if an http connection
fails to deliver the full set of requested bytes in one operation
(nonstandard MRC files and PyMOL files)
bug fix: adds correct dates for code versions of JSmol files
bug fix: load quartz.cif {1 1 1};draw symop @1 @5 does not work
due to refactoring error 7/9/2014 (14.3.3)
bug fix: throw context prior to try/catch within function causes exception
bug fix: polyhedra not removed from rendering when central atoms are deleted
bug fix: translation of atoms after deleting atoms having dots on crashes
Jmol
bug fix: magnetic CIF files incompatible with displacement modulation
bug fix: write PNG xxx.png when xxx.png is currently loaded saves 0-length
data files
bug fix: load ASYNC was documented for 14.1.12_2014.03.10 but never
implemented
bug fix: load quartz.cif supercell "2a,2b+a,c" not working properly
bug fix: modulated magnetic moment scaling by VECTORS MAX x.x not saved in
state
for modulations that are 0,0,0.
bug fix: magnetic CIF reader not automatically showing modulation
bug fix: load SUPERCELL {x y z} not working correctly in terms of packing
bug fix: load SUPERCELL not working correctly with modulation or magnetic
bug fix: JavaScript drag-drop clears cache inappropriately when spt file is
dropped
bug fix: show PROPERTIES broken
bug fix: plot PROPERTIES changes axis settings
bug fix: magCIF file reading broken for new file format
bug fix: CIF operators with n/9 not supported
bug fix: CIF reader broken for load xxx.cif 1 (14.1.17_2014.06.07)
bug fix: CONTACT command not functioning properly with multiple models
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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