Sorry - I was looking at the script console. Indeed Jmol 14.3.12 and Jmol 13.3.7 both 'think Cif'
Console output is below for both: 1) From Jmol 14.3.12_2015.02.25c: cacheGet file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif false FileManager opening 1 file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif cache cleared StatusListener notifyFileLoaded: zapped FileManager.getAtomSetCollectionFromFile(file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif) cacheGet file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif false FileManager opening 1 file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif The Resolver thinks Cif TITLE: Crystal Structure of a Thermostable Family-43 Glyco Hydrolase Setting space group name to HM:P 1 21 1 Time for openFile(file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif): 904 ms reading 10880 atoms ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false 1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them. model 1.1 alternative locations: AB Default Van der Waals type for model set to Babel 10880 atoms created ModelSet: autobonding; use autobond=false to not generate bonds automatically StatusListener notifyFileLoaded: 4QQS.cif TITLE: Crystal Structure of a Thermostable Family-43 Glyco Hydrolase 2) From Jmol 13.3.7: FileManager opening 1 file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif cache cleared PNGJ cache cleared StatusListener notifyFileLoaded: zapped FileManager.getAtomSetCollectionFromFile(file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif) FileManager opening 1 file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif The Resolver thinks Cif Setting space group name to HM:P 1 21 1 ?que? missing _struct_site property:2 Time for openFile(file:/srv/www/htdocs/publcryst/cifmoldb/gui/tests/4QQS.cif): 423 ms reading 10880 atoms ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false 1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them. model 1.1 alternative locations: AB Default Van der Waals type for model set to Babel 10880 atoms created ModelSet: autobonding; use autobond=false to not generate bonds automatically StatusListener notifyFileLoaded: 4QQS.cif Quoting Angel Herráez <angel.herr...@uah.es>: >> Using Jmol application I dont get any 'resolver' messages in the console, > > I thought I've seen that... > I meant it just as a diagnostic tool, not a solution. > > Ah, it is at least in the "Jmol Java Console" (accesible form Jmol > application top menu > Help ) > Jmol 14.3.12_2015-02-19 > > load http://cif.publcryst.co.uk/cifmoldb/gui/tests/noname.mcf > > ---- > FileManager.getAtomSetCollectionFromFile(http://cif.publcryst.co.uk/ci > fmoldb/gui/tests/noname.mcf) > cacheGet http://cif.publcryst.co.uk/cifmoldb/gui/tests/noname.mcf > false > FileManager opening 1 > http://cif.publcryst.co.uk/cifmoldb/gui/tests/noname.mcf > The Resolver thinks Cif > Setting space group name to HM:F 2 3 > Time for > openFile(http://cif.publcryst.co.uk/cifmoldb/gui/tests/noname.mcf): > 722 ms > reading 5505 atoms > ModelSet: haveSymmetry:false haveUnitcells:true > haveFractionalCoord:false > 1 model in this collection. Use getProperty "modelInfo" or > getProperty "auxiliaryInfo" to inspect them. > Default Van der Waals type for model set to Babel > 5505 atoms created > ModelSet: autobonding; use autobond=false to not generate bonds > automatically > StatusListener notifyFileLoaded: noname.mcf > ---- > > > > ------------------------------------------------------------------------------ > Dive into the World of Parallel Programming The Go Parallel Website, > sponsored > by Intel and developed in partnership with Slashdot Media, is your > hub for all > things parallel software development, from weekly thought leadership blogs to > news, videos, case studies, tutorials and more. Take a look and join the > conversation now. http://goparallel.sourceforge.net/ > _______________________________________________ > Jmol-users mailing list > Jmol-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-users > ------------------------------------------------------------------------------ Dive into the World of Parallel Programming The Go Parallel Website, sponsored by Intel and developed in partnership with Slashdot Media, is your hub for all things parallel software development, from weekly thought leadership blogs to news, videos, case studies, tutorials and more. Take a look and join the conversation now. http://goparallel.sourceforge.net/ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
