I do not understand why sometimes the build Jmol.jar does not match what I have when debugging. But that was the culprit with Rolf's problem.
http://sourceforge.net/projects/jmol/files/Jmol-beta/Jmol%2014.3/Jmol%2014.3.16/Jmol-14.3.16_2015.08.19-binary.zip/download Jmol.___JmolVersion="14.3.16_2015.08.19" bug fix: PyMOL reader does not load surface from PNGJ file bug fix: PDB reader can skip assignments of secondary structure after first structure loaded during session bug fix: bad build of Jmol.jar
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