New versions of JSmol are supposed to be backwards compatible. There are
very few intentional changes that require changes in the JSmol command
scripts, generally quite minor.
It would be good to "set debugscript on" and see where the errors occur.
If you are still stumped, copy the error reports into an email and maybe
someone on this list will have a suggestion.
If you have loops in your JSmol commands (for or while), I think some
older syntaxes may not work. Check the manual.
http://chemapps.stolaf.edu/jmol/docs/
Good luck! -Eric
On 6/9/16 3:30 PM, Jennifer L. Muzyka wrote:
We recently got a new server to host the SpectralZoo
(http://chemserv.centre.edu/muzyka/spectralzoo), with new versions of
PHP and MySQL. Some of my SpectralZoo scripts broke, so I thought it
might be time to upgrade the Jmol (actually JSmol) that I’m using on
the site. I see even more errors, and I’m stumped about how to solve
them. It looks like I was previously using a version of Jmol from
11/2013. Can someone point me to something to read to help me sort
out the changes so that I can manage the troubleshooting? (Clearly I
have been away from programming for too long…..) I would appreciate
any advice you can offer or articles you can point me towards. Thanks.
Jennifer
Jennifer Muzyka
H.W. Stodghill Jr. and Adele H. Stodghill Professor of Chemistry
Centre College
600 West Walnut Street
Danville, KY 40422
jennifer.muz...@centre.edu <mailto:jennifer.muz...@centre.edu>
http://web.centre.edu/muzyka
http://organicers.org
859-238-5413
fax 859-236-7925
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What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are
consuming the most bandwidth. Provides multi-vendor support for NetFlow,
J-Flow, sFlow and other flows. Make informed decisions using capacity
planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e
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