As an update, I was able to build and run the repl with release-0.3 by
making the following change (simply adding the --disable-dtrace flag when
configuring libuv):
diff --git a/deps/Makefile b/deps/Makefile
index c702eaa..9aa622e 100644
--- a/deps/Makefile
+++ b/deps/Makefile
@@ -467,7 +467,7 @@ libuv/config.status:
$(JULIAHOME)/.git/modules/deps/libuv/HEAD
endif
libuv/config.status: libuv/configure
cd libuv && \
- ./configure --with-pic $(CONFIGURE_COMMON) $(UV_OPTS)
+ ./configure --with-pic --disable-dtrace $(CONFIGURE_COMMON)
$(UV_OPTS)
touch -c $@
$(UV_SRC_TARGET): libuv/config.status
touch -c libuv/aclocal.m4
On Wednesday, February 18, 2015 at 10:14:08 AM UTC+1, Patrick Sanan wrote:
>
> This problem is still persisting for us with the release-0.3 branch (which
> we would like to use since our application code depends on it).
>
> From grepping and nm-ing around, it seems like (at least to the point
> where my build fails) the offending symbols mentioned above are (only)
> declared in the automatically-generated header
> $JULIA_DIR/deps/libuv/include/uv-dtrace.h .
>
> In our successful build of the master branch, the symbols are defined in
> $JULIA_DIR/deps/libuv/uv-dtrace.o (which does not appear in the release-0.3
> build).
>
> I don't know anything about dtrace, but it does seem that it was removed
> from libuv recently :
> https://github.com/joyent/libuv/commit/cb5140023b109aa9bb6b97d1bebc9f251b8195ac
>
> . I don't notice it being used in julia anywhere besides with libuv (simply
> based on grepping the julia directory).
>
> Any ideas on a good way to proceed? Perhaps there's a simple way to
> disable dtrace in the libuv build?
>
>
> On Thursday, February 5, 2015 at 5:19:32 AM UTC+1, Viral Shah wrote:
>>
>> `make -j n` used to work correctly at one point, but bugs in the makefile
>> dependencies keep creeping in. Usually, I just run one final `make` to make
>> sure that everything got built correctly.
>>
>> -viral
>>
>>
>> On Wednesday, February 4, 2015 at 7:12:14 PM UTC+5:30, Patrick Sanan
>> wrote:
>>>
>>> I was able to successfully build julia from source and run the repl from
>>> a (login) node on the machine. The build procedure was almost identical to
>>> previous attempts (following the instructions provided to use the intel
>>> compilers and MKL, without using any local versions of dependencies), but
>>> from a different machine and operating system (Ubuntu 14.04.1 LTS instead
>>> of OS X 10.9.5). The only noticeable difference is that the intel compilers
>>> will fail if locale information is not available, which it's not by default
>>> when logging in from OS X (see
>>> https://software.intel.com/en-us/articles/cdiag912), but perhaps there
>>> are others.
>>>
>>> The only minor problem was that running make -j 12 produced an error
>>> about libopenlibm.so.1 not existing. Re-running make -j 12 led to a
>>> successful build so my assumption is that there is an unspecified
>>> dependency involving this library.
>>>
>>>
>>>
>>> On Tuesday, February 3, 2015 at 9:59:12 PM UTC+1, Patrick Sanan wrote:
>>>>
>>>> Someone at the computer center did manage to build successfully julia
>>>> today using intel compilers and MKL, using a procedure very similar to
>>>> mine, so I am hopeful that we will be able to isolate any differences
>>>> tomorrow.
>>>>
>>>> On 03/02/15 09:49 PM, Tony Kelman wrote:
>>>>
>>>> I can't find any evidence of an issue ever being reported on this, no
>>>> mention of uv_tick__stop_semaphore on Julia's issue tracker.
>>>>
>>>> I'd have to dig into libuv's source code and see where these symbols
>>>> normally come from, and determine what is unusual about these Cray systems.
>>>>
>>>>
>>>> On Tuesday, February 3, 2015 at 4:18:46 AM UTC-8, Patrick Sanan wrote:
>>>>>
>>>>> I am having a nearly-identical issue with the release-0.3 branch (the
>>>>> same errors with uv_tick__... symbols) on a Cray XC-40 system. Has any
>>>>> solution or workaround been discovered since this was posted?
>>>>>
>>>>> On Friday, October 17, 2014 at 5:05:52 PM UTC+2, Niklas Vanhainen
>>>>> wrote:
>>>>>>
>>>>>> Hi
>>>>>>
>>>>>> I'm having problems getting Julia to build on a cluster that I'm
>>>>>> using. It's a Cray XC-30 cluster with an Ivy-Bridge architecture, and it
>>>>>> appears to be running on SLES 11
>>>>>>
>>>>>> Right now, I'm building this without linking to external BLAS, FFTW,
>>>>>> etc. libraries (the heavy lifting matrix operations will be done in a C
>>>>>> function anyways, and I had major problems getting anywhere while
>>>>>> linking
>>>>>> to cray-libsci)
>>>>>> The problem I'm having right now is that "flisp" will not link,
>>>>>> because of problems with the symbols "uv_tick__stop_semaphore" and
>>>>>> "uv_tick__start_semaphore" in libuv. I've tried using both the provided
>>>>>> libuv as well as downloading it separately and compiling. I get related
>>>>>> but
>>>>>> different problems in both cases.
>>>>>>
>>>>>> First, in the case with the provided libuv:
>>>>>>
>>>>>>
>>>>>> Making install in SYM
>>>>>> CC src/jltypes.o
>>>>>> CC src/gf.o
>>>>>> CC src/support/hashing.o
>>>>>> CC src/support/timefuncs.o
>>>>>> CC src/support/ptrhash.o
>>>>>> CC src/support/operators.o
>>>>>> CC src/support/utf8.o
>>>>>> CC src/support/ios.o
>>>>>> CC src/support/htable.o
>>>>>> CC src/support/bitvector.o
>>>>>> CC src/support/int2str.o
>>>>>> CC src/support/libsupportinit.o
>>>>>> CC src/support/arraylist.o
>>>>>> CC src/support/strtod.o
>>>>>> LINK src/support/libsupport.a
>>>>>> CC src/flisp/flisp.o
>>>>>> CC src/flisp/builtins.o
>>>>>> CC src/flisp/string.o
>>>>>> CC src/flisp/equalhash.o
>>>>>> CC src/flisp/table.o
>>>>>> CC src/flisp/iostream.o
>>>>>> CC src/flisp/julia_extensions.o
>>>>>> LINK src/flisp/libflisp.a
>>>>>> CC src/flisp/flmain.o
>>>>>> LINK src/flisp/flisp
>>>>>> /cfs/milner/scratch/n/niklasva/julia_build/julia/usr/lib/libuv.a(libuv_la-core.o):(.note.stapsdt+0x24):
>>>>>>
>>>>>> undefined reference to `uv_tick__start_semaphore'
>>>>>> /cfs/milner/scratch/n/niklasva/julia_build/julia/usr/lib/libuv.a(libuv_la-core.o):(.note.stapsdt+0x70):
>>>>>>
>>>>>> undefined reference to `uv_tick__stop_semaphore'
>>>>>> /cfs/milner/scratch/n/niklasva/julia_build/julia/usr/lib/libuv.a(libuv_la-core.o):(.note.stapsdt+0xbc):
>>>>>>
>>>>>> undefined reference to `uv_tick__stop_semaphore'
>>>>>> collect2: error: ld returned 1 exit status
>>>>>> make[3]: *** [flisp] Error 1
>>>>>> make[2]: *** [flisp/libflisp.a] Error 2
>>>>>> make[1]: *** [julia-release] Error 2
>>>>>> make: *** [release] Error 2
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> Second, in the case of the external libuv:
>>>>>> Making install in SYM
>>>>>> CC src/jltypes.o
>>>>>> CC src/gf.o
>>>>>> CC src/support/hashing.o
>>>>>> CC src/support/timefuncs.o
>>>>>> CC src/support/ptrhash.o
>>>>>> CC src/support/operators.o
>>>>>> CC src/support/utf8.o
>>>>>> CC src/support/ios.o
>>>>>> CC src/support/htable.o
>>>>>> CC src/support/bitvector.o
>>>>>> CC src/support/int2str.o
>>>>>> CC src/support/libsupportinit.o
>>>>>> CC src/support/arraylist.o
>>>>>> CC src/support/strtod.o
>>>>>> LINK src/support/libsupport.a
>>>>>> CC src/flisp/flisp.o
>>>>>> CC src/flisp/builtins.o
>>>>>> CC src/flisp/string.o
>>>>>> CC src/flisp/equalhash.o
>>>>>> CC src/flisp/table.o
>>>>>> CC src/flisp/iostream.o
>>>>>> CC src/flisp/julia_extensions.o
>>>>>> LINK src/flisp/libflisp.a
>>>>>> CC src/flisp/flmain.o
>>>>>> LINK src/flisp/flisp
>>>>>> /usr/bin/ld: flisp: hidden symbol `uv_tick__stop_semaphore' in
>>>>>> /cfs/scratch/n/niklasva/libuv/lib/libuv.a(uv-dtrace.o) is referenced by
>>>>>> DSO
>>>>>> /usr/bin/ld: final link failed: Bad value
>>>>>> collect2: error: ld returned 1 exit status
>>>>>> make[3]: *** [flisp] Error 1
>>>>>> make[2]: *** [flisp/libflisp.a] Error 2
>>>>>> make[1]: *** [julia-release] Error 2
>>>>>> make: *** [release] Error 2
>>>>>>
>>>>>> In the second case, this is the contents of my Make.user:
>>>>>> override LIBUV = /cfs/scratch/n/niklasva/libuv/lib/libuv.a
>>>>>> override LIBUV_INC = /cfs/scratch/n/niklasva/libuv/include/
>>>>>>
>>>>>>
>>>>>> I would be very grateful if someone could help me fix this problem.
>>>>>>
>>>>>
>>>>
>>>>
>>
>
