Hi Charles,
I don't know if helps but since the release of the new mouse assembly
(m37) in Ensembl we have created a web-based 'wizard' which enables you
to convert a GFF file from Mouse assembly m36 to m37.
http://www.ensembl.org/Mus_musculus/assemblyconverter
Hope this helps,
Ben
Charles Danko wrote:
Hello, everyone,
Is there a way to access older assemblies in BioMart?
If not, I suppose that I can the UCSC genome LiftOver tool here:
http://genome.ucsc.edu/cgi-bin/hgLiftOver
Thanks,
Charles
--
Benoit Ballester, PhD
Ensembl Team
European Bioinformatics Institute (EMBL-EBI)
Wellcome Trust Genome Campus, Hinxton
Cambridge CB10 1SD, United Kingdom
