On 9 Feb 2008, at 09:24, Arek Kasprzyk wrote:
On 5-Feb-08, at 10:58 PM, Charles Danko wrote:
Hello, everyone,
Is there a way to access older assemblies in BioMart?
Ensembl mart (www.ensembl.org) has this functionality
but currently it is limited to mouse only as far as I know. go to
result page and
click 'View first 10 rows as .....'. it will give you the choice of
viewing the coordinates
in mouse 36
In addition, the archive sites in Ensembl
http://aug2006.archive.ensembl.org/index.html
have biomarts though at the moment the archive sites at ensembl are
feeling a little
flaky because of hardware issues sadly - this should not last too
long (but probably
will last 1 month or so of flakiness)
a.
If not, I suppose that I can the UCSC genome LiftOver tool here:
http://genome.ucsc.edu/cgi-bin/hgLiftOver
Thanks,
Charles
