Hello Syed,

I am selecting Ensembl attributes:
Ensembl Gene ID
Gene name
Chromosome name

over all genes (no filter). I notice that as soon as I run a BioMart query, before I do any selection, the log looks as if it is looking up all data from BioMart until the exception is thrown.

I am running Taverna 1.7 out of the box; perhaps I should allocate more memory for the java virtual machine (taverna sets the default to 300M) ?

Isabelle

Syed Haider wrote:
Hi Isabelle,

which attributes/filters you are trying to retrieve ?


syed


On Fri, 2008-04-04 at 15:55 +0200, Isabelle Phan wrote:
or oanatinus_snp
lookinf for oanatinus_snp
lookinf for oanatinus_snp


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Isabelle Phan, D.Phil.
Swiss Institute of Bioinformatics         Tel: (+41 22) 379 51 89
CMU - 1, rue Michel Servet                Fax: (+41 22) 379 58 58
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