Hi Syed, I tried this each time I change some settings. I also delete the cached registry and make sure to do a clean config.
I then re-start the apache, but still no hyperlinks! I mysteriously did not get the previous reply from Jennifer... please could you re-send? Is there a setting I need to enable in the settings.conf or in the httpd.conf file? Cheers, Ketan -----Original Message----- From: Syed Haider [mailto:[email protected]] Sent: 09 October 2009 10:09 To: Patel, Ketan (SANDWICH) Cc: Richard Holland; BioMart mart-dev Subject: Re: Biomart help needed Hi Ketan, Did you get the reply from Jennifer on this? I did receive a reply on the list. Anyhow, have you done the following: 1. after editing the linkoutURL in martEditor, Export 2. perl bin/configure.pl -r conf/your_reg.xml --clean 3. restarted your apache ? Cheers Syed Patel, Ketan (SANDWICH) wrote: > Hi Both, > > Can either of you help with this problem below? I tried the mailing > list but got no response. > > Appreciate any help you can provide! > > Cheers, > > Ketan > > --- > > Hi Biomart experts! > > I have freshly installed Biomart 0.7 on a Mac OS 10 Leopard system, and > I cannot seem to get the linkoutURL to work. > > Here is an example of the string I am using in the linkoutURL part of > MartEditor: > > http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=%s > > I have also tried : > > exturl|http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=%s > > and > > exturl|/Homo_sapiens/Gene/Summary?g=%s > > (With exturl = http://www.ensembl.org in the settings.conf file) > > This doesn't work either, I've also tried other URLs to e.g. Entrez and > nothing seems to work. I get the attributes that I want, but they are > not hyperlinked. > > Is there a setting somewhere that I need to enable for the hyperlinks to > work? > > Any help would be greatly appreciated! > > Thanks, > > Ketan > >
