Hi there, I have absolute zero problems running BioMart 0.7 on Perl 5.10.1, what are these issues? One should be running any odd numbered minor version releases of Perl as these are development versions (e.g. 5.9.x, 5.11.x ... )
If anyone needs any help with installation of Apache 2.2.15, mod_perl 2.0.4 and BioMart 0.7 using Perl 5.10.x I will put my the step-by-step instructions. Compared to the installation instructions found in the BioMart 0.7 manual I just had a couple of changes/additions. best, Leandro On Wed, Apr 28, 2010 at 5:47 PM, Junjun Zhang <[email protected]>wrote: > Hi Abby, > > It is known that there are some issues with perl 5.10.x when running > biomart-perl. If you can please try perl 5.9.x. > > Let us know how it goes. > > Cheers, > Junjun > > > ------------------------------ > *From:* [email protected] [mailto:[email protected]] *On > Behalf Of *Abigail Cabunoc > *Sent:* Wednesday, April 28, 2010 10:57 AM > > *To:* [email protected] > *Subject:* [mart-dev] Problems configuring biomart-perl - weird modules? > > Dearest BioMart, > > When I run configure.pl, I get a list of really strange looking modules to > install: > > > > > > > > acabu...@wb-blast:/usr/local/wormbase/biomart/biomart-perl$ perl bin/ > configure.pl -r conf/martDBLocation.xml > > > > Do you want to install in API only mode [y/n] [n]: > > > > Checking prerequisites ... please install the following modules: > > > > APR::Connection > > Apache2::FunctionTable > > $class\::Const > > Apache::Constants > > $loader > > 5.006 > > Apache2::StructureTable > > DOES_NOT_exist > > > > > > > > > > And I am pretty sure that a lot of these are not real modules. I was > wondering if any of you knew why this was happening? I’m using perl 5.10.1, > apache2.2.15, and mod_perl 2.0.4. Um… I have a feeling that I may not have > installed mod_perl entirely correctly… > > > > Thanks! > > Abby > > > >
