Hello everybody, I was wondering if Mauve indicates the overall percent identity/similarity among the sequences compared?
Thanks for your answer, Orhan At 12:33 PM 3/13/2009, Aaron Darling wrote: >Hello Andreas, On Thu, 2009-03-12 at 11:10 >+0100, Andreas Dötsch wrote: > Original Mauve >works fine and so it seems for >progressiveMauve. > However, when aligning >multiple Genomes with progressiveMauve the > >program itself completes without error but >crashes on loading the > results into the GUI. > >The output files are created and seem to be OK. >Loading them with the > GUI again leads to crash >with the same symptoms. > > Here's the Java >error message: > > Exception in thread >"Thread-27" >java.lang.ArrayIndexOutOfBoundsException: 59 You >have encountered a rather unfortunate bug in the >2.2.0 release of Mauve. The alignment completes >successfully, but the data inside the .backbone >file is erroneous, causing the GUI to crash when >displaying the alignment. We have fixed the >bug, but until we are able to make a new release >official, I would recommend that you use a >snapshot release. The snapshots are available to >download at this web site: >http://gel.ahabs.wisc.edu/mauve/snapshots If you >encounter errors running a snapshot, please do >let us know. Cheers, -Aaron >------------------------------------------------------------------------------ >Apps built with the Adobe(R) Flex(R) framework >and Flex Builder(TM) are powering Web 2.0 with >engaging, cross-platform capabilities. Quickly >and easily build your RIAs with Flex Builder, >the Eclipse(TM)based development software that >enables intelligent coding and step-through >debugging. Download the free 60 day trial. >http://p.sf.net/sfu/www-adobe-com >_______________________________________________ >Mauve-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/mauve-users ------------------------------------------------------------------------------ Apps built with the Adobe(R) Flex(R) framework and Flex Builder(TM) are powering Web 2.0 with engaging, cross-platform capabilities. Quickly and easily build your RIAs with Flex Builder, the Eclipse(TM)based development software that enables intelligent coding and step-through debugging. Download the free 60 day trial. http://p.sf.net/sfu/www-adobe-com _______________________________________________ Mauve-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/mauve-users
