Hi, I have been using progressive mauve for the alignment of 55 bacterial genomes ... I had a question concerning the output tree; how exactly is it constructed?? And how can I get an identity matrix based on % genome identity between the genomes as an output if I want to use that for hierarchical clustering and phylogenetic tree construction?? Looking forward to your reply! Thanks, Norhan
-- Norhan Mahfouz PhD student Bioinformatics (AG Schroeder) Technische Universität Dresden Biotechnology Center Tatzberg 47/49 01307 Dresden, Germany ------------------------------------------------------------------------------ BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT Develop your own process in accordance with the BPMN 2 standard Learn Process modeling best practices with Bonita BPM through live exercises http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual- event?utm_ source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF _______________________________________________ Mauve-users mailing list Mauve-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mauve-users
