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Sorry for posting this twice, but it seems the screenshot was not added
correctly: Hi, I recently updated to the latest version of MITK and noticed that the orthogonal slice widget is not properly working anymore for my data sets. I'm working with my own itk file reader that is used instead of the itk filereader. Apart from that, everything is the original MITK-code (so an image node is created by the mitkDataTreeNodeFactory and so on). I've attached a screenshot of the result of the slice widget:  It looks like the widget does not know the correct extends of the image that is loaded or something similar, but I have really no idea what could cause the problem. In addition, it worked well so far with the former version of MITK. Does anyone have an idea how I can fix this problem or what change in the MITK source might have caused this behavior? Thanks a lot, best, Marius P.S.: below you find the log of the datamanager for the data set in case it might be of use: --------------------DataInfo-------------------- Microscanning1 Image (0724EB50) PixelType: unsigned short BitsPerElement: 16 NumberOfComponents: 1 BitsPerComponent: 16 Dimension: 3 Dimensions: 40000 40 40 TimeSlicedGeometry: TimeSlicedGeometry (070CBD98) IndexToWorldTransform: ScalableAffineTransform (0722D248) RTTI typeinfo: class itk::ScalableAffineTransform<float,3> Reference Count: 2 Modified Time: 10396 Debug: Off Observers: none Matrix: 0.0025 0 0 0 2.5 0 0 0 2.5 Offset: [0, 0, 0] Center: [0, 0, 0] Translation: [0, 0, 0] Inverse: 400 0 0 0 0.4 0 0 0 0.4 Singular: 0 Scale : 1 1 1 MatrixScale : 1 1 1 BoundingBox: Object (0722E380) RTTI typeinfo: class itk::BoundingBox<unsigned long,3,float,class itk::VectorContainer<unsigned long,class itk::Point<float,3> > > Reference Count: 1 Modified Time: 66319 Debug: Off Observers: none Bounding Box: ( 0,40000 0,40 0,40 ) Origin: [0, 0, 0] ImageGeometry: 1 Spacing: [0.0025, 2.5, 2.5] TimeBounds: [-3.40282e+038, 3.40282e+038] RTTI typeinfo: class mitk::TimeSlicedGeometry Reference Count: 1 Modified Time: 10515 Debug: Off Observers: none EvenlyTimed: 1 TimeSteps: 1 GetGeometry3D(0): SlicedGeometry3D (043BC8B8) IndexToWorldTransform: ScalableAffineTransform (0722D248) RTTI typeinfo: class itk::ScalableAffineTransform<float,3> Reference Count: 2 Modified Time: 10396 Debug: Off Observers: none Matrix: 0.0025 0 0 0 2.5 0 0 0 2.5 Offset: [0, 0, 0] Center: [0, 0, 0] Translation: [0, 0, 0] Inverse: 400 0 0 0 0.4 0 0 0 0.4 Singular: 0 Scale : 1 1 1 MatrixScale : 1 1 1 BoundingBox: Object (043649E8) RTTI typeinfo: class itk::BoundingBox<unsigned long,3,float,class itk::VectorContainer<unsigned long,class itk::Point<float,3> > > Reference Count: 1 Modified Time: 10309 Debug: Off Observers: none Bounding Box: ( 0,40000 0,40 0,40 ) Origin: [0, 0, 0] ImageGeometry: 1 Spacing: [0.0025, 2.5, 2.5] TimeBounds: [-3.40282e+038, 3.40282e+038] RTTI typeinfo: class mitk::SlicedGeometry3D Reference Count: 1 Modified Time: 10469 Debug: Off Observers: none EvenlySpaced: 1 DirectionVector: [0, 0, 1] Slices: 40 GetGeometry2D(0): PlaneGeometry (043AB320) IndexToWorldTransform: ScalableAffineTransform (072307E0) RTTI typeinfo: class itk::ScalableAffineTransform<float,3> Reference Count: 1 Modified Time: 10456 Debug: Off Observers: none Matrix: 0.0025 0 0 0 2.5 0 0 0 2.5 Offset: [0, 0, 0] Center: [0, 0, 0] Translation: [0, 0, 0] Inverse: 400 0 0 0 0.4 0 0 0 0.4 Singular: 0 Scale : 1 1 1 MatrixScale : 1 1 1 BoundingBox: Object (07277D10) RTTI typeinfo: class itk::BoundingBox<unsigned long,3,float,class itk::VectorContainer<unsigned long,class itk::Point<float,3> > > Reference Count: 1 Modified Time: 10466 Debug: Off Observers: none Bounding Box: ( 0,40000 0,40 0,1 ) Origin: [0, 0, 0] ImageGeometry: 1 Spacing: [0.0025, 2.5, 2.5] TimeBounds: [-3.40282e+038, 3.40282e+038] RTTI typeinfo: class mitk::PlaneGeometry Reference Count: 1 Modified Time: 10516 Debug: Off Observers: none ScaleFactorMMPerUnitX: 0.0025 ScaleFactorMMPerUnitY: 2.5 Normal: [0, 0, 2.5] Microscanning1 ----------------End of DataInfo----------------- |
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