Dear Huanxiang, please excuse the delay. Regarding you question. Yes, this can be done programmatically, but currently it would mean, that you implement your own plugin containing a view. This view can then browse the data storage and e.g. store the nodes you want via mitk::IOUtils::Save(). So it will involve some C++ and your own build of MITK. But the programming task itself is trival. As you can navigate through the node hierarchy of the datastorage.
When https://phabricator.mitk.org/T27189 (or alike) is realized, there will be also a programmatic interface to the datastorage that does not involve C++, but a REST interface. But it is currently only "wishlist", so one should not wait for it. I hope this answer helps. Best, Ralf -------------------------------------- Message: 1 Date: Thu, 23 Apr 2020 15:57:24 +0200 From: "Lu, Huanxiang" <huanxiang...@roche.com> To: mitk-users@lists.sourceforge.net Subject: [mitk-users] Batch exporting annotation data Message-ID: <CAJJDatF08ePZo8rqCQn4DSCmwpgC6MQ-RAGDWgFifjP0SCg=p...@mail.gmail.com> Content-Type: text/plain; charset="utf-8" Hello, We now have annotators using MITK to segment images for us. Since there are many images in one annotation task and each image has many annotation layers, it is quite tedious to save each of the annotation layer manually through the UI. I am wondering if there is an easier way to export those annotations? Could it be done programmatically? Thank you, Huanxiang -- *Huanxiang Lu, PhD* Scientific Solution Engineering & Architecture (S2EA) Pharma Research and Early Development Informatics F. Hoffmann-La Roche Ltd Grenzacherstrasse 124 4070 Basel Switzerland Phone: +41 61 682 14 24 Confidentiality Note: This message is intended only for the use of the named recipient(s) and may contain confidential and/or privileged information. If you are not the intended recipient, please contact the sender and delete this message. Any unauthorized use of the information contained in this message is prohibited. -------------- next part -------------- An HTML attachment was scrubbed... ------------------------------ ------------------------------ Subject: Digest Footer _______________________________________________ mitk-users mailing list mitk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mitk-users ------------------------------ End of mitk-users Digest, Vol 167, Issue 10 ******************************************* _______________________________________________ mitk-users mailing list mitk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mitk-users
