| Did you compile the NCBI source tree first? You'll need to do that before you compile mpiblast.
The order of compiling is
1. Patch NCBI Blast with the patch supplied by mpiblast 2. Compile NCBI Blast 3. Compile MPI-Blast and during configure point to the NCBI source tree that you just compiled.
-Anoop On Mar 20, 2006, at 2:06 PM, Chuming Chen wrote: I did apply the ncbi_Dec2005_evalue.patch. But I still got the same error messages.
On 3/20/06, Anoop Rajendra < [EMAIL PROTECTED]> wrote:If you're compiling with the latest NCBI source tree, you will want
to use ncbi_Dec2005_evalue.patch
rather than the june 2005 patch.
-Anoop
On Mar 20, 2006, at 1:18 PM, Chuming Chen wrote:
> Hi all,
>
> I failed to compile mpiblast-pio-1.4.0 on Rocks cluster 4.1.
>
> Here is the error messages I got:
>
> myblastool.c: In function `BLASTOptionNewEx':
> myblastool.c:1462: error: structure has no member named
> `no_check_score'
> myblastool.c :1486: error: structure has no member named
> `no_check_score'
> myblastool.c: In function `BLASTPostSearchLogic':
> myblastool.c:6263: error: structure has no member named
> `original_expect_value'
> myblastool.c:6269: warning: assignment from incompatible pointer type
> make[2]: *** [myblastool.o] Error 1
> make[2]: Leaving directory `/home/chen/src/mpiblast-1.4.0-pio/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/home/chen/src/mpiblast-1.4.0-pio/src'
> make: *** [all-recursive] Error 1
>
> Am I missing anything? I have NCBI src tree and have applied the
> ncbi_Jun2005_evalue_patch.
>
> Thank you for your help.
>
> Chuming Chen
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