Isn't ALTER a DDL, not DML?  So I don't think you would find anything in undo 
logs.

> -----Original Message-----
> From: Larry Martell [mailto:larry.mart...@gmail.com]
> Sent: Thursday, September 27, 2012 1:20 PM
> To: Rick James
> Cc: mysql mailing list
> Subject: checking progress of alter table on an InnoDB table (Was: Re:
> checking progress of alter table on a MyISAM table)
> 
> So we changed the table from MyISAM to InnoDB. I read that the 'undo
> log entries' shown in 'show engine innodb status' would correspond to
> the number of rows that have been operated on throughout the process of
> the ALTER. The table we're altering has 115,096,205 rows, and the
> alter's been running for 28 hours, and the undo log entries is 9309.
> Also that number seems to go up and down. So clearly, it's not what I
> think.
> 
> So anyone know a way to monitor the status of the alter now that it's
> an InnoDB table?
> 
> 
> On Wed, Sep 26, 2012 at 10:31 AM, Rick James <rja...@yahoo-inc.com>
> wrote:
> > Not really.
> > You could look at the .TYD and .TYI file sizes and compare to the
> .MYD and .MYI, but that can be deceptive.  If the table is really big,
> and has lots of indexes, the generation of the indexes might go slower
> and slower -- hence any math on the sizes would be optimistic.
> >
> >> -----Original Message-----
> >> From: Larry Martell [mailto:larry.mart...@gmail.com]
> >> Sent: Wednesday, September 26, 2012 8:52 AM
> >> To: mysql mailing list
> >> Subject: checking progress of alter table on a MyISAM table
> >>
> >> Is there any way to check on the progress of a long running alter
> >> table on a MyISAM table? I know it can be done with an InnoDB table,
> >> but I haven't found a way to do it on with a MyISAM table.
> 
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