Thanks for response, It is amazon EC2-unix instance. I run tomcat-8 in the machine with Java-spring.
Server was running fine for so many days then it suddenly started showing
above error.
I did not change anything like classpath etc. Even that same war file is
running without errors in my windows system, but not in remote system.
Can It be caused by mismatch in "NEO4J SDN" version in spring and "NEO4J"
installer version.
* I am attaching .classpath file here with email.
* Packaging is ".war".
* I put war in "/webapps" folder of tomcat and run tomcat.
If you need any more information Please let me know.
Thanks again.
On Mon, Mar 14, 2016 at 2:18 PM, Mattias Persson <matt...@neotechnology.com>
wrote:
> That looks like a classpath issue. How are you running neo4j, using a
> downloaded server and the provided scripts or embedded and packaging the
> dependencies manually? Can you list the classpath in use here?
>
> On Mon, Mar 14, 2016 at 8:32 AM, Radheshyam Verma <radhe2...@gmail.com>
> wrote:
>
>> Hi Mattias Persson,
>> I need help regarding an error I get when I start server. Can you help me
>> find the cause? Here is the stacktrace:-
>>
>> ERROR [org.neo4j]: Exception when stopping
>> org.neo4j.index.impl.lucene.LuceneDataSource@2aad7c69
>> org.neo4j.index.impl.lucene.LuceneDataSource.unbindLogicalLog()V
>> java.lang.NoSuchMethodError:
>> org.neo4j.index.impl.lucene.LuceneDataSource.unbindLogicalLog()V
>> at
>> org.neo4j.index.impl.lucene.LuceneDataSource.stop(LuceneDataSource.java:343)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.shutdown(LifeSupport.java:547)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.remove(LifeSupport.java:339)
>> at
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.unregisterDataSource(XaDataSourceManager.java:272)
>> at
>> org.neo4j.index.lucene.LuceneKernelExtension.stop(LuceneKernelExtension.java:92)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.extension.KernelExtensions.stop(KernelExtensions.java:125)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.shutdown(LifeSupport.java:185)
>> at
>> org.neo4j.kernel.InternalAbstractGraphDatabase.shutdown(InternalAbstractGraphDatabase.java:809)
>> at
>> org.springframework.data.neo4j.support.DelegatingGraphDatabase.shutdown(DelegatingGraphDatabase.java:283)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>> at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>> at java.lang.reflect.Method.invoke(Method.java:606)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.invokeCustomDestroyMethod(DisposableBeanAdapter.java:353)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.destroy(DisposableBeanAdapter.java:276)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:578)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:554)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingleton(DefaultListableBeanFactory.java:925)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:523)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingletons(DefaultListableBeanFactory.java:932)
>> at
>> org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:997)
>> at
>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:547)
>> at
>> org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:446)
>> at
>> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:328)
>> at
>> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
>> at
>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4760)
>> at
>> org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5184)
>> at
>> org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
>> at
>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:724)
>> at
>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:700)
>> at
>> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:714)
>> at
>> org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:919)
>> at
>> org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1704)
>> at
>> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>> at java.lang.Thread.run(Thread.java:745)
>> 2016-03-14 07:10:41.034+0000 ERROR [org.neo4j]: Exception when stopping
>> org.neo4j.index.lucene.LuceneKernelExtension@7addfa02 Component
>> 'org.neo4j.index.impl.lucene.LuceneDataSource@2aad7c69' failed to stop.
>> Please see attached cause exception.
>> org.neo4j.kernel.lifecycle.LifecycleException: Component
>> 'org.neo4j.index.impl.lucene.LuceneDataSource@2aad7c69' failed to stop.
>> Please see attached cause exception.
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:532)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.shutdown(LifeSupport.java:547)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.remove(LifeSupport.java:339)
>> at
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.unregisterDataSource(XaDataSourceManager.java:272)
>> at
>> org.neo4j.index.lucene.LuceneKernelExtension.stop(LuceneKernelExtension.java:92)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.extension.KernelExtensions.stop(KernelExtensions.java:125)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.shutdown(LifeSupport.java:185)
>> at
>> org.neo4j.kernel.InternalAbstractGraphDatabase.shutdown(InternalAbstractGraphDatabase.java:809)
>> at
>> org.springframework.data.neo4j.support.DelegatingGraphDatabase.shutdown(DelegatingGraphDatabase.java:283)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>> at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>> at java.lang.reflect.Method.invoke(Method.java:606)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.invokeCustomDestroyMethod(DisposableBeanAdapter.java:353)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.destroy(DisposableBeanAdapter.java:276)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:578)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:554)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingleton(DefaultListableBeanFactory.java:925)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:523)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingletons(DefaultListableBeanFactory.java:932)
>> at
>> org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:997)
>> at
>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:547)
>> at
>> org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:446)
>> at
>> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:328)
>> at
>> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
>> at
>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4760)
>> at
>> org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5184)
>> at
>> org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
>> at
>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:724)
>> at
>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:700)
>> at
>> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:714)
>> at
>> org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:919)
>> at
>> org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1704)
>> at
>> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>> at java.lang.Thread.run(Thread.java:745)
>> Caused by: java.lang.NoSuchMethodError:
>> org.neo4j.index.impl.lucene.LuceneDataSource.unbindLogicalLog()V
>> at
>> org.neo4j.index.impl.lucene.LuceneDataSource.stop(LuceneDataSource.java:343)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> ... 41 more
>> 2016-03-14 07:10:41.037+0000 ERROR [org.neo4j]: Exception when stopping
>> org.neo4j.kernel.extension.KernelExtensions@237232d4 Component
>> 'org.neo4j.index.lucene.LuceneKernelExtension@7addfa02' failed to stop.
>> Please see attached cause exception.
>> org.neo4j.kernel.lifecycle.LifecycleException: Component
>> 'org.neo4j.index.lucene.LuceneKernelExtension@7addfa02' failed to stop.
>> Please see attached cause exception.
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:532)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.extension.KernelExtensions.stop(KernelExtensions.java:125)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.shutdown(LifeSupport.java:185)
>> at
>> org.neo4j.kernel.InternalAbstractGraphDatabase.shutdown(InternalAbstractGraphDatabase.java:809)
>> at
>> org.springframework.data.neo4j.support.DelegatingGraphDatabase.shutdown(DelegatingGraphDatabase.java:283)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>> at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>> at java.lang.reflect.Method.invoke(Method.java:606)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.invokeCustomDestroyMethod(DisposableBeanAdapter.java:353)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.destroy(DisposableBeanAdapter.java:276)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:578)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:554)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingleton(DefaultListableBeanFactory.java:925)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:523)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingletons(DefaultListableBeanFactory.java:932)
>> at
>> org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:997)
>> at
>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:547)
>> at
>> org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:446)
>> at
>> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:328)
>> at
>> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:107)
>> at
>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4760)
>> at
>> org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5184)
>> at
>> org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
>> at
>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:724)
>> at
>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:700)
>> at
>> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:714)
>> at
>> org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:919)
>> at
>> org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1704)
>> at
>> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>> at
>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>> at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>> at java.lang.Thread.run(Thread.java:745)
>> Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component
>> 'org.neo4j.index.impl.lucene.LuceneDataSource@2aad7c69' failed to stop.
>> Please see attached cause exception.
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:532)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.shutdown(LifeSupport.java:547)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.remove(LifeSupport.java:339)
>> at
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.unregisterDataSource(XaDataSourceManager.java:272)
>> at
>> org.neo4j.index.lucene.LuceneKernelExtension.stop(LuceneKernelExtension.java:92)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> ... 36 more
>> Caused by: java.lang.NoSuchMethodError:
>> org.neo4j.index.impl.lucene.LuceneDataSource.unbindLogicalLog()V
>> at
>> org.neo4j.index.impl.lucene.LuceneDataSource.stop(LuceneDataSource.java:343)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> ... 41 more
>>
>>
>> I am running neo4j on unix machine. The server runs fine on my local
>> machine though its just that when i deploy it in server it produces error.
>>
>>
>> On Wed, Jan 27, 2016 at 9:20 PM, Mattias Persson <
>> matt...@neotechnology.com> wrote:
>>
>>> You're correct in principle, but it's not a new "query" as such that is
>>> sent every time. The traversal state is kept between calls to hasNext/next,
>>> but that's just a detail.
>>>
>>> On Wed, Jan 27, 2016 at 1:20 PM, Radheshyam Verma <radhe2...@gmail.com>
>>> wrote:
>>>
>>>> Thanks for the reply,
>>>> So you mean that for each iteration of following 'FOR' loop, a query is
>>>> sent to get next node from database if it exists.
>>>> and that not all the nodes are returned in one go before 'FOR' loop
>>>> even starts.
>>>>
>>>> for(Node currentNode : database.traversalDescription()
>>>> .depthFirst()
>>>> .uniqueness(Uniqueness.NODE_GLOBAL)
>>>> .order(BranchOrderingPolicies.PREORDER_BREADTH_FIRST)
>>>> .relationships(<RelationshipType>, Direction.BOTH)
>>>> .evaluator(Evaluators.excludeStartPosition())
>>>> .traverse(node)
>>>> .nodes())
>>>> {
>>>>
>>>> }
>>>>
>>>> Thanks for the response again.
>>>>
>>>>
>>>> On Wed, Jan 27, 2016 at 2:24 PM, Mattias Persson <
>>>> matt...@neotechnology.com> wrote:
>>>>
>>>>> With the traversal framework, the actual work of traversing happens
>>>>> lazily on every call on hasNext/next on the returned Traverser (in the end
>>>>> Iterator<Path>). You can simply stop pulling more paths after a certain
>>>>> number of paths have been extracted.
>>>>>
>>>>>
>>>>> On Monday, January 25, 2016 at 8:31:37 AM UTC+1, Radheshyam Verma
>>>>> wrote:
>>>>>>
>>>>>> Hi,
>>>>>> I am using traversal framework to traverse graph which returns nodes.
>>>>>> Can we somehow specify a limit on number of nodes which the traversal
>>>>>> returns like we do in Query using "LIMIT" and "SKIP".
>>>>>> Thanks.
>>>>>>
>>>>> --
>>>>> You received this message because you are subscribed to a topic in the
>>>>> Google Groups "Neo4j" group.
>>>>> To unsubscribe from this topic, visit
>>>>> https://groups.google.com/d/topic/neo4j/2A1QiEOwofU/unsubscribe.
>>>>> To unsubscribe from this group and all its topics, send an email to
>>>>> neo4j+unsubscr...@googlegroups.com.
>>>>> For more options, visit https://groups.google.com/d/optout.
>>>>>
>>>>
>>>> --
>>>> You received this message because you are subscribed to a topic in the
>>>> Google Groups "Neo4j" group.
>>>> To unsubscribe from this topic, visit
>>>> https://groups.google.com/d/topic/neo4j/2A1QiEOwofU/unsubscribe.
>>>> To unsubscribe from this group and all its topics, send an email to
>>>> neo4j+unsubscr...@googlegroups.com.
>>>> For more options, visit https://groups.google.com/d/optout.
>>>>
>>>
>>>
>>>
>>> --
>>> Mattias Persson
>>> Neo4j Hacker at Neo Technology
>>>
>>> --
>>> You received this message because you are subscribed to a topic in the
>>> Google Groups "Neo4j" group.
>>> To unsubscribe from this topic, visit
>>> https://groups.google.com/d/topic/neo4j/2A1QiEOwofU/unsubscribe.
>>> To unsubscribe from this group and all its topics, send an email to
>>> neo4j+unsubscr...@googlegroups.com.
>>> For more options, visit https://groups.google.com/d/optout.
>>>
>>
>> --
>> You received this message because you are subscribed to a topic in the
>> Google Groups "Neo4j" group.
>> To unsubscribe from this topic, visit
>> https://groups.google.com/d/topic/neo4j/2A1QiEOwofU/unsubscribe.
>> To unsubscribe from this group and all its topics, send an email to
>> neo4j+unsubscr...@googlegroups.com.
>> For more options, visit https://groups.google.com/d/optout.
>>
>
>
>
> --
> Mattias Persson
> Neo4j Hacker at Neo Technology
>
> --
> You received this message because you are subscribed to a topic in the
> Google Groups "Neo4j" group.
> To unsubscribe from this topic, visit
> https://groups.google.com/d/topic/neo4j/2A1QiEOwofU/unsubscribe.
> To unsubscribe from this group and all its topics, send an email to
> neo4j+unsubscr...@googlegroups.com.
> For more options, visit https://groups.google.com/d/optout.
>
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.classpath
Description: Binary data
