i usually do smoothing simply by first doing an accurate track, then stabilize followed immediately by a matchmove with the reverse tracking data but with the jitter removed. gives you lots of control over which jitter frequency you want to target.
you can do this with a 2D or 3D track, whatever works best.

you can also try automatic tools, the warp stabilizer in after effects is sometimes amazing and sometimes useless. or if you have an old licence of shake around, smoothcam is worth a try too in some cases.

++ chris

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